CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001484001
(
Nippostrongylus brasiliensis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
NBR_0001484001
T252348_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001484001-mRNA-1
MADF
11
108
LIDTVRAFPELWDDKHPQFKDGIKRSQAWAVVKRDLEKCLGKDFSDDVLKRAFKNLKDTYRRKLKEIKDHNMRSTGSDVSDNVEKIKSWMFFDALTFL
Links
Other
MADF
family TFs
Other
Nippostrongylus brasiliensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_036360
Albugo laibachii
ALNC14_036360
N
24448
Aureococcus anophagefferens
24448
N
20508
Aureococcus anophagefferens
20508
N
estExt_Genewise1Plus.C_470032
Phytophthora capsici
estExt_Genewise1Plus.C_470032
N
estExt_Genewise1.C_160059
Phytophthora capsici
estExt_Genewise1.C_160059
N
PITG_01056
Phytophthora infestans
PITG_01056
N
fgenesh_scip_prom.46568.8980
Phytophthora kernoviae
fgenesh_scip_prom.46568.8980
N
fgenesh_scip_prom.28083.905
Phytophthora lateralis
fgenesh_scip_prom.28083.905
N
fgenesh_scip_prom.28083.10584
Phytophthora lateralis
fgenesh_scip_prom.28083.10584
N
F443_05707
Phytophthora parasitica
F443_05707
N
F443_21644
Phytophthora parasitica
F443_21644
N
Phyra79700
Phytophthora ramorum
Phyra79700
N
Phyra96342
Phytophthora ramorum
Phyra96342
N
Physo127211
Phytophthora sojae
Physo127211
N
Physo132833
Phytophthora sojae
Physo132833
N
maker-pag1_scaffold_415-fgenesh-gene-0.5
Pythium aphanidermatum
maker-pag1_scaffold_415-fgenesh-gene-0.5
N
maker-pag1_scaffold_1181-snap-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_1181-snap-gene-0.1
N
maker-par_contig_2427-snap-gene-0.2
Pythium arrhenomanes
maker-par_contig_2427-snap-gene-0.2
N
maker-pir_contig_139-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_139-fgenesh-gene-0.3
N
PYU1_G000095
Pythium ultimum
PYU1_G000095
N
PYU1_G001814
Pythium ultimum
PYU1_G001814
N
maker-pve_contig_30-snap-gene-0.60
Pythium vexans
maker-pve_contig_30-snap-gene-0.60
N
SPRG_07305
Saprolegnia parasitica
SPRG_07305
N
SPRG_08919
Saprolegnia parasitica
SPRG_08919
N