scaffold190-EXSNAP2012.38 (Pristionchus exspectatus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 scaffold190-EXSNAP2012.38 T252529_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG08311
M02267_2.00 		Caenorhabditis briggsae
RCGCGGAM
KTCCGCGY		 PBM
Weirauch et al.(2014)
pTH9393 		0.885 0.512
madf-9
M02277_2.00 		Caenorhabditis elegans
VYGCGGAH
DTCCGCRB		 PBM
Weirauch et al.(2014)
pTH8333 		0.880 0.500
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold190-EXSNAP2012.38 MADF 84 163

Links

Other MADF family TFs
Other Pristionchus exspectatus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CTRG_04350 Candida tropicalis CTRG_04350 N
PAS_chr2-1_0511 Komagataella pastoris PAS_chr2-1_0511 N
LELG_01337 Lodderomyces elongisporus LELG_01337 N
fgenesh1_pg.C_chr_6.1000186 Pichia stipitis fgenesh1_pg.C_chr_6.1000186 N
PICST_32705 Scheffersomyces stipitis PICST_32705 N
SPAPADRAFT_145213 Spathaspora passalidarum SPAPADRAFT_145213 N