CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0001295501
(
Strongylus vulgaris
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
SVUK_0001295501
T252597_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0001295501-mRNA-1
MADF
11
85
FVRAVQIHPEVYEDYNAKDAERAWEVIADLFEITVSDAKKQWLELVRIHRFMYLDLPDEAFKVIAPKEDPRWQAA
Links
Other
MADF
family TFs
Other
Strongylus vulgaris
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_42996
Aegilops tauschii
F775_42996
N
MLOC_65953
Hordeum vulgare
MLOC_65953
N
LPERR06G15630
Leersia perrieri
LPERR06G15630
N
ORGLA06G0157800
Oryza glaberrima
ORGLA06G0157800
N
OGLUM06G20200
Oryza glumaepatula
OGLUM06G20200
N
BGIOSGA023114
Oryza indica
BGIOSGA023114
N
OLONG_009530
Oryza longistaminata
OLONG_009530
N
ONIVA06G22830
Oryza nivara
ONIVA06G22830
N
ORUFI06G20120
Oryza rufipogon
ORUFI06G20120
N
OS06G0570900
Oryza sativa
OS06G0570900
N
Pavir.J30600
Panicum virgatum
Pavir.J30600
N
Si007981m.g
Setaria italica
Si007981m.g
N
Sb10g022530
Sorghum bicolor
Sb10g022530
N
TRIUR3_12207
Triticum urartu
TRIUR3_12207
N
GRMZM2G340177
Zea mays
GRMZM2G340177
N