CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL61
(
Arabidopsis lyrata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Al_scaffold_0004_541
T252784_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Al_scaffold_0004_541
MADS box
31
78
KIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF
Links
Other
MADS box
family TFs
Other
Arabidopsis lyrata
TFs
244 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_12646
Fusarium fujikuroi
FFUJ_12646
N
0.000
FOXG_14525
Fusarium oxysporum
FOXG_14525
N
0.000
FVEG_13367
Fusarium verticillioides
FVEG_13367
N
0.000
fgenesh1_pg.sca_26_chr2_2_0000211
Nectria haematococca
fgenesh1_pg.sca_26_chr2_2_0000211
N
0.000
GSTUM_00004762001
Tuber melanosporum
GSTUM_00004762001
I
0.000