CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00095p00172370
(
Amborella trichopoda
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AMTR_s00095p00172370
T252817_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM98250
MADS box
10
55
WIANDSARKSSFKKRKRGLLKKIAELSTLCGVPAFAVVYGPGDHTP
Links
Other
MADS box
family TFs
Other
Amborella trichopoda
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
UCREL1_2010
Eutypa lata
UCREL1_2010
I
MYCTH_2135800
Myceliophthora thermophila
MYCTH_2135800
I
NEUTE1DRAFT_149165
Neurospora tetrasperma
NEUTE1DRAFT_149165
I
PFICI_09208
Pestalotiopsis fici
PFICI_09208
I
SMAC_08510
Sordaria macrospora
SMAC_08510
I
THITE_2024068
Thielavia terrestris
THITE_2024068
I
PV09_07470
Verruconis gallopava
PV09_07470
I