CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA003303
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA003303
T252969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA003303-PA
MADS box
10
57
KVAKDSTRRLTFKKRRRGLIKKAGELASLCGIGVCVVVYGEGEVKPEV
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR01G11040
Leersia perrieri
LPERR01G11040
N
0.745
OBART01G12040
Oryza barthii
OBART01G12040
N
1.000
OB01G21760
Oryza brachyantha
OB01G21760
N
0.783
ORGLA01G0101600
Oryza glaberrima
ORGLA01G0101600
N
1.000
OGLUM01G13480
Oryza glumaepatula
OGLUM01G13480
N
1.000
ONIVA01G14270
Oryza nivara
ONIVA01G14270
N
1.000
OPUNC01G11720
Oryza punctata
OPUNC01G11720
N
0.851
ORUFI01G13010
Oryza rufipogon
ORUFI01G13010
N
1.000
GRMZM5G853066
Zea mays
GRMZM5G853066
N
0.702