BN7_244 (Wickerhamomyces ciferrii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BN7_244 T253035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.700 0.700
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCH40710 MADS box 1 31

Links

Other MADS box family TFs
Other Wickerhamomyces ciferrii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N 0.000
MLOC_72117 Hordeum vulgare MLOC_72117 N 0.000
LPERR04G18520 Leersia perrieri LPERR04G18520 N 0.000
OBART02G28020 Oryza barthii OBART02G28020 N 0.000
OB02G35300 Oryza brachyantha OB02G35300 N 0.000
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N 0.000
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N 0.000
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N 0.000
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N 0.000
BGIOSGA014504 Oryza indica BGIOSGA014504 N 0.000
BGIOSGA005839 Oryza indica BGIOSGA005839 N 0.000
OMERI02G27200 Oryza meridionalis OMERI02G27200 N 0.000
OMERI04G19030 Oryza meridionalis OMERI04G19030 N 0.000
ONIVA02G31120 Oryza nivara ONIVA02G31120 N 0.000
ONIVA04G21910 Oryza nivara ONIVA04G21910 N 0.000
OPUNC02G25720 Oryza punctata OPUNC02G25720 N 0.000
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N 0.000
OS02G0681900 Oryza sativa OS02G0681900 N 0.000
OS04G0580300 Oryza sativa OS04G0580300 N 0.000
Pavir.Aa00944 Panicum virgatum Pavir.Aa00944 N 0.000
Pavir.Ga00626 Panicum virgatum Pavir.Ga00626 N 0.000
Pavir.J39953 Panicum virgatum Pavir.J39953 N 0.000
Si009601m.g Setaria italica Si009601m.g N 0.000
Si016627m.g Setaria italica Si016627m.g N 0.000
Sb04g031770 Sorghum bicolor Sb04g031770 N 0.000
Traes_2BL_46E59998A1 Triticum aestivum Traes_2BL_46E59998A1 N 0.000
GRMZM2G173429 Zea mays GRMZM2G173429 N 0.000
GRMZM2G109869 Zea mays GRMZM2G109869 N 0.000
GRMZM2G028438 Zea mays GRMZM2G028438 N 0.000