Bo4g139260 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo4g139260 T253112_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.725 0.725
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g139260.1 MADS box 26 65

Links

Other MADS box family TFs
Other Brassica oleracea TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05262 Capronia coronata A1O1_05262 I
A1O3_09505 Capronia epimyces A1O3_09505 I
Z519_07023 Cladophialophora bantiana Z519_07023 N
G647_02614 Cladophialophora carrionii G647_02614 N
A1O5_02490 Cladophialophora psammophila A1O5_02490 N
A1O7_07473 Cladophialophora yegresii A1O7_07473 N
HMPREF1541_08216 Cyphellophora europaea HMPREF1541_08216 N
PV10_07582 Exophiala mesophila PV10_07582 N
PV11_01466 Exophiala sideris PV11_01466 N
PV05_05964 Exophiala xenobiotica PV05_05964 I
Z517_02809 Fonsecaea pedrosoi Z517_02809 N
Z518_09480 Rhinocladiella mackenziei Z518_09480 I