CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g176440
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo9g176440
T253215_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g176440.1
MADS box
11
58
VEERKRRATVCQRRMKELIQMAEELTIVCDMSACLVFYNRNNGKLVAW
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_032900
Aspergillus clavatus
CADACLAG00002434
N
CADAFLAG00001919
Aspergillus flavus
CADAFLAG00001919
N
AFUA_1G01590
Aspergillus fumigatus
CADAFUAG00009046
N
ANIA_00388
Aspergillus nidulans
CADANIAG00002311
N
CADANGAG00004571
Aspergillus niger
CADANGAG00004571
N
CADAORAG00001816
Aspergillus oryzae
CADAORAG00001816
N
EURHEDRAFT_459439
Aspergillus ruber
EURHEDRAFT_459439
N
NFIA_023070
Neosartorya fischeri
CADNFIAG00001890
N
Pc22g22560
Penicillium chrysogenum
Pc22g22560
N
PDIP_62740
Penicillium digitatum
PDIP_62740
N
PEX1_043850
Penicillium expansum
PEX1_043850
N
PITC_006770
Penicillium italicum
PITC_006770
N
PDE_04461
Penicillium oxalicum
PDE_04461
N
PCH_Pc22g22560
Penicillium rubens
PCH_Pc22g22560
N
U727_00433251571
Penicillium solitum
U727_00433251571
N