COCVIDRAFT_17132 (Bipolaris victoriae)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 COCVIDRAFT_17132 T253518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.750 0.750
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUN25713 MADS box 10 57

Links

Other MADS box family TFs
Other Bipolaris victoriae TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_191328 Agaricus bisporus AGABI2DRAFT_191328 N
FOMPIDRAFT_100949 Fomitopsis pinicola FOMPIDRAFT_100949 N
GYMLUDRAFT_41485 Gymnopus luxurians GYMLUDRAFT_41485 N
HETIRDRAFT_60513 Heterobasidion irregulare HETIRDRAFT_60513 N
PAXINDRAFT_117828 Paxillus involutus PAXINDRAFT_117828 N
PAXRUDRAFT_32093 Paxillus rubicundulus PAXRUDRAFT_32093 N
PILCRDRAFT_818457 Piloderma croceum PILCRDRAFT_818457 N
PILCRDRAFT_822045 Piloderma croceum PILCRDRAFT_822045 N
PLEOSDRAFT_41112 Pleurotus ostreatus PLEOSDRAFT_41112 N
SCHCODRAFT_256135 Schizophyllum commune SCHCODRAFT_256135 N
CY34DRAFT_807551 Suillus luteus CY34DRAFT_807551 N
BN946_scf184988.g14 Trametes cinnabarina BN946_scf184988.g14 N