CORT_0E04370 (Candida orthopsilosis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 CORT_0E04370 T253520_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.812 0.812
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.812 0.812
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.771 0.771
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCG24024 MADS box 10 57

Links

Other MADS box family TFs
Other Candida orthopsilosis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_51704 Bipolaris maydis COCC4DRAFT_51704 N
COCMIDRAFT_4668 Bipolaris oryzae COCMIDRAFT_4668 N
COCSADRAFT_181150 Bipolaris sorokiniana COCSADRAFT_181150 N
COCCADRAFT_7380 Bipolaris zeicola COCCADRAFT_7380 N
LEMA_P108100.1 Leptosphaeria maculans LEMA_P108100.1 N