mef2aa (Takifugu rubripes)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ENSTRUG00000007090 T253853_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MEF2A
M03340_2.00 		Homo sapiens
KCTAWAAATAGM
KCTATTTWTAGM		 SELEX
Jolma et al.(2013)
MEF2A_1 		1.000 1.000
MEF2A
M07979_2.00 		Homo sapiens
NDDHYAAAAATARHH
DDYTATTTTTRDHHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha 		1.000 1.000
MEF2A
M08212_2.00 		Homo sapiens
CTAWWWWTAG
CTAWWWWTAG		 ChIP-seq
Contrino et al.(2012)
Mv88 		1.000 1.000
MEF2A
M08213_2.00 		Homo sapiens
AAAATAGM
KCTATTTT		 ChIP-seq
Contrino et al.(2012)
Mv90 		1.000 1.000
MEF2A
M09247_2.00 		Homo sapiens
DYYAAAAATAGMH
DKCTATTTTTRRH		 Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A 		1.000 1.000
Mef2a
M09255_2.00 		Mus musculus
DDCYAWAAATARMH
DKYTATTTWTRGHH		 Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A 		1.000 1.000
Mef2a
M09599_2.00 		Mus musculus
CYNDAAATAG
CTATTTHNRG		 Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529 		1.000 1.000
MEF2A
M10933_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AMEF2_Q6 		1.000 1.000
MEF2A
M10934_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMEF2_Q6 		1.000 1.000
MEF2A
M10935_2.00 		Homo sapiens
BTCTAAAAATAACYCY
RGRGTTATTTTTAGAV		 Transfac
Matys et al.(2006)
V$MEF2_01 		1.000 1.000
MEF2A
M10936_2.00 		Homo sapiens
BNNNDDDCTAWAAATAGMHNNN
NNNDKCTATTTWTAGHHHNNNV		 Transfac
Matys et al.(2006)
V$MEF2_02 		1.000 1.000
MEF2A
M10937_2.00 		Homo sapiens
NNNNDWKCTAWAAATAGMHHNN
NNDDKCTATTTWTAGMWHNNNN		 Transfac
Matys et al.(2006)
V$MEF2_03 		1.000 1.000
MEF2A
M10938_2.00 		Homo sapiens
NVTGTTRCTAWAAATAGAAHHN
NDDWTCTATTTWTAGYAACABN		 Transfac
Matys et al.(2006)
V$MEF2_04 		1.000 1.000
MEF2A
M10939_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_05 		1.000 1.000
MEF2A
M10940_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2A_Q6 		1.000 1.000
MEF2A
M10941_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2_Q6_02 		1.000 1.000
MEF2A
M10942_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MMEF2_Q6 		1.000 1.000
MEF2A
M10943_2.00 		Homo sapiens
NDKCTAWAAATAGMHH
DDKCTATTTWTAGMHN		 Transfac
Matys et al.(2006)
V$RSRFC4_01 		1.000 1.000
MEF2A
M10944_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RSRFC4_Q2 		1.000 1.000
MEF2C
M02745_2.00 		Homo sapiens
TWCTAWAAATAG
CTATTTWTAGWA		 SELEX
Jolma et al.(2010)
MEF2C_dimer 		0.979 0.979
MEF2C
M05551_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX 		0.979 0.979
MEF2C
M08149_2.00 		Homo sapiens
NDDMYAAAAATAGMH
DKCTATTTTTRKHHN		 ChIP-seq
Mathelier et al.(2014)
MA0497.1 		0.979 0.979
MEF2C
M07980_2.00 		Homo sapiens
NDDYYAAAAATAGHH
DDCTATTTTTRRHHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha 		0.979 0.979
MEF2C
M09248_2.00 		Homo sapiens
DYYAAAAATARMH
DKYTATTTTTRRH		 Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A 		0.979 0.979
Mef2c
M09253_2.00 		Mus musculus
DDMYAAAAATAGMHN
NDKCTATTTTTRKHH		 Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A 		0.979 0.979
MEF2C
M09597_2.00 		Homo sapiens
DHYWDAAATARM
KYTATTTHWRDH		 Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465 		0.979 0.979
MEF2C
M10945_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2C_02 		0.979 0.979
MEF2C
M10946_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2C_Q4 		0.979 0.979
MEF2C
M05552_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX 		0.979 0.979
MEF2D
M03343_2.00 		Homo sapiens
DCTAWAAATAGM
KCTATTTWTAGH		 SELEX
Jolma et al.(2013)
MEF2D_1 		0.958 0.958
MEF2D
M05555_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX 		0.958 0.958
MEF2D
M09250_2.00 		Homo sapiens
CTAWAAATAGMH
DKCTATTTWTAG		 Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A 		0.958 0.958
Mef2d
M09252_2.00 		Mus musculus
DDCTAWAAATAGMH
DKCTATTTWTAGHH		 Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A 		0.958 0.958
MEF2D
M10957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2D_Q4 		0.958 0.958
MEF2D
M05556_2.00 		Homo sapiens
CYWWATWWGG
CCWWATWWRG		 SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX 		0.958 0.958
MEF2B
M03344_2.00 		Homo sapiens
RCTAWAAATAGM
KCTATTTWTAGY		 SELEX
Jolma et al.(2013)
MEF2B_1 		0.917 0.917
MEF2B
M05557_2.00 		Homo sapiens
CYNDWWWHGG
CCDWWWHNRG		 SELEX
Yin et al.(2017)
MEF2B_eDBD_HT-SELEX 		0.917 0.917
MEF2B
M05559_2.00 		Homo sapiens
CCVDWTATGGTAACA
TGTTACCATAWHBGG		 SELEX
Yin et al.(2017)
MEF2B_FL_HT-SELEX 		0.917 0.917
MEF2B
M09251_2.00 		Homo sapiens
CYWAAAATAGHHHH
DDDDCTATTTTWRG		 Misc
Kulakovskiy et al.(2013)
MEF2B_HUMAN.H11MO.0.A 		0.917 0.917
MEF2B
M05558_2.00 		Homo sapiens
CYWWWWWNGG
CCNWWWWWRG		 SELEX
Yin et al.(2017)
MEF2B_eDBD_Methyl-HT-SELEX 		0.917 0.917
MEF2B
M05560_2.00 		Homo sapiens
CCVDATATGGTAACR
YGTTACCATATHBGG		 SELEX
Yin et al.(2017)
MEF2B_FL_Methyl-HT-SELEX 		0.917 0.917
Mef2
M08214_2.00 		Drosophila melanogaster
YTAWWWWTAR
YTAWWWWTAR		 ChIP-seq
Contrino et al.(2012)
Mf26 		0.896 0.896
Mef2b
M10958_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEF2B_02 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000017406 MADS box 10 57
ENSTRUP00000017407 MADS box 10 57
ENSTRUP00000017408 MADS box 10 57
ENSTRUP00000017409 MADS box 10 57

Links

Other MADS box family TFs
Other Takifugu rubripes TFs

490 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000192 Ailuropoda melanoleuca ENSAMEG00000000192 I 0.000
Alligator_sinensis_CCG006744.1 Alligator sinensis Alligator_sinensis_CCG006744.1 I 0.000
ENSAPLG00000006384 Anas platyrhynchos ENSAPLG00000006384 I 0.000
LCORL Anolis carolinensis ENSACAG00000002012 I 0.000
Afo_R006360 Aptenodytes forsteri Afo_R006360 I 0.000
ENSP00000371661-D1 Bos grunniens ENSP00000371661-D1 I 0.000
LCORL Bos taurus ENSBTAG00000046561 I 0.000
Brh_R013202 Buceros rhinoceros Brh_R013202 I 0.000
LCORL Callithrix jacchus ENSCJAG00000012800 I 0.000
Aan_R007397 Calypte anna Aan_R007397 I 0.000
LCORL Canis familiaris ENSCAFG00000016672 I 0.000
ENSCPOG00000003269 Cavia porcellus ENSCPOG00000003269 I 0.000
ENSCSAG00000016522 Chlorocebus sabaeus ENSCSAG00000016522 I 0.000
lcorl Danio rerio ENSDARG00000070098 I 0.000
LCORL Dasypus novemcinctus ENSDNOG00000001545 I 0.000
ENSDORG00000003797 Dipodomys ordii ENSDORG00000003797 I 0.000
LCORL Equus caballus ENSECAG00000000648 I 0.000
LCORL Felis catus ENSFCAG00000029474 I 0.000
ENSFALG00000009227 Ficedula albicollis ENSFALG00000009227 I 0.000
LCORL Gallus gallus ENSGALG00000014421 I 0.000
Gfo_R010322 Geospiza fortis Gfo_R010322 I 0.000
LCORL Gorilla gorilla ENSGGOG00000014894 I 0.000
LCORL Homo sapiens ENSG00000178177 D 0.000
ENSSTOG00000000960 Ictidomys tridecemlineatus ENSSTOG00000000960 I 0.000
ENSLACG00000017771 Latimeria chalumnae ENSLACG00000017771 I 0.000
LCORL Loxodonta africana ENSLAFG00000009691 I 0.000
ENSP00000371661 Macaca fascicularis ENSP00000371661 I 0.000
LCORL Meleagris gallopavo ENSMGAG00000012554 I 0.000
ENSMICG00000008878 Microcebus murinus ENSMICG00000008878 I 0.000
LCORL Monodelphis domestica ENSMODG00000000757 I 0.000
ENSMPUG00000002301 Mustela putorius furo ENSMPUG00000002301 I 0.000
Lcorl Mus musculus ENSMUSG00000015882 I 0.000
Myotis_brandtii_LCORL_10024397 Myotis brandtii Myotis_brandtii_LCORL_10024397 I 0.000
LCORL Myotis lucifugus ENSMLUG00000013781 I 0.000
ENSNLEG00000016679 Nomascus leucogenys ENSNLEG00000016679 I 0.000
Ogr00836 Ophisaurus gracilis Ogr00836 I 0.000
LCORL Oryctolagus cuniculus ENSOCUG00000006802 I 0.000
LCORL Otolemur garnettii ENSOGAG00000005593 I 0.000
ENSOARG00000004333 Ovis aries ENSOARG00000004333 I 0.000
LCORL Pan troglodytes ENSPTRG00000015943 I 0.000
ENSPANG00000024022 Papio anubis ENSPANG00000024022 I 0.000
ENSPSIG00000017051 Pelodiscus sinensis ENSPSIG00000017051 I 0.000
Pvit_18026 Pogona vitticeps Pvit_18026 I 0.000
LCORL Procavia capensis ENSPCAG00000007105 I 0.000
LCORL Pteropus vampyrus ENSPVAG00000013601 I 0.000
ENSSHAG00000015746 Sarcophilus harrisii ENSSHAG00000015746 I 0.000
LCORL Sus scrofa ENSSSCG00000008748 I 0.000
LCORL Taeniopygia guttata ENSTGUG00000009625 I 0.000
ENSTSYG00000014055 Tarsius syrichta ENSTSYG00000014055 I 0.000
LCORL Tursiops truncatus ENSTTRG00000016951 I 0.000
Tal_R001804 Tyto alba Tal_R001804 I 0.000
LCORL Vicugna pacos ENSVPAG00000010356 I 0.000