fgenesh1_pg.C_scaffold_8001596 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 fgenesh1_pg.C_scaffold_8001596 T254004_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8001596 MADS box 6 51

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCSADRAFT_21263 Bipolaris sorokiniana COCSADRAFT_21263 N
A1O1_01405 Capronia coronata A1O1_01405 N
G647_01344 Cladophialophora carrionii G647_01344 N
PV07_06220 Cladophialophora immunda PV07_06220 N
A1O5_11371 Cladophialophora psammophila A1O5_11371 N
A1O7_01283 Cladophialophora yegresii A1O7_01283 N
HMPREF1120_00436 Exophiala dermatitidis HMPREF1120_00436 N
Z517_03673 Fonsecaea pedrosoi Z517_03673 N
NechaG75777 Fusarium solani NechaG75777 N
estExt_Genewise1Plus.C_10560 Mycosphaerella fijiensis estExt_Genewise1Plus.C_10560 N
fgenesh1_pg.sca_1_chr1_3_0001388 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001388 N
OIDMADRAFT_74156 Oidiodendron maius OIDMADRAFT_74156 N
OIDMADRAFT_189260 Oidiodendron maius OIDMADRAFT_189260 N
PFICI_11615 Pestalotiopsis fici PFICI_11615 N
SNOG_01186 Phaeosphaeria nodorum SNOG_01186 N
MYCFIDRAFT_54726 Pseudocercospora fijiensis MYCFIDRAFT_54726 N
Z518_10649 Rhinocladiella mackenziei Z518_10649 N
SNOG_01186 Stagonospora nodorum SNOG_01186 N
VHEMI04633 Torrubiella hemipterigena VHEMI04633 N
VHEMI05472 Torrubiella hemipterigena VHEMI05472 N
VDAG_09064 Verticillium dahliae VDAG_09064 N