CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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G210_1171
(
Candida maltosa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
G210_1171
T254060_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.812
0.812
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.812
0.812
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.771
0.771
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.771
0.771
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMG48270
MADS box
10
57
PLKDERNRTVTFVKRKAGLFKKAHELAVLCQVDLAVIIVGSNNKVYEF
Links
Other
MADS box
family TFs
Other
Candida maltosa
TFs
163 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV10_06305
Exophiala mesophila
PV10_06305
N
FOMPIDRAFT_1142296
Fomitopsis pinicola
FOMPIDRAFT_1142296
I
Genemark.194_g
Heterobasidion annosum
Genemark.194_g
I
PAXINDRAFT_170130
Paxillus involutus
PAXINDRAFT_170130
I
PAXRUDRAFT_783296
Paxillus rubicundulus
PAXRUDRAFT_783296
I
PHLGIDRAFT_110627
Phlebiopsis gigantea
PHLGIDRAFT_110627
I
M422DRAFT_250500
Sphaerobolus stellatus
M422DRAFT_250500
I
CY34DRAFT_492980
Suillus luteus
CY34DRAFT_492980
I