H101_08129 (Trichophyton interdigitale)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 H101_08129 T254436_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EZF28189 MADS box 10 57

Links

Other MADS box family TFs
Other Trichophyton interdigitale TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I
Bo7g093030 Brassica oleracea Bo7g093030 I
Bra010010 Brassica rapa Bra010010 I
Bra020620 Brassica rapa Bra020620 I
PK11472.1 Cannabis sativa PK11472.1 I
PK05128.1 Cannabis sativa PK05128.1 D
Ca_03753 Cicer arietinum Ca_03753 I
Cla020112 Citrullus lanatus Cla020112 I
Cla015037 Citrullus lanatus Cla015037 I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
Cucsa.289120 Cucumis sativus Cucsa.289120 I
Cucsa.133290 Cucumis sativus Cucsa.133290 I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
GLYMA19G43420 Glycine max GLYMA19G43420 I
GLYMA03G40730 Glycine max GLYMA03G40730 I
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I
LPERR12G15130 Leersia perrieri LPERR12G15130 I
Lus10006590.g Linum usitatissimum Lus10006590.g I
Lus10015913.g Linum usitatissimum Lus10015913.g I
MDP0000270365 Malus domestica MDP0000270365 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
mgf009803m Mimulus guttatus mgf009803m I
mgf012838m Mimulus guttatus mgf012838m I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
OPUNC12G16360 Oryza punctata OPUNC12G16360 I
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I
gw1.213.115.1 Physcomitrella patens gw1.213.115.1 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
Pm020231 Prunus mume Pm020231 I
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I
29598.m000468 Ricinus communis 29598.m000468 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
Sb08g020600 Sorghum bicolor Sb08g020600 I
TCM_026349 Theobroma cacao TCM_026349 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I