CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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K443DRAFT_100748
(
Laccaria amethystina
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
K443DRAFT_100748
T254480_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MADS5
M10970_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_02
0.710
0.710
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK00213
MADS box
12
55
TRKNGLFKKAYELGVLCSVEVAVIIFGAVFFSAVNRPGHGPKLY
Links
Other
MADS box
family TFs
Other
Laccaria amethystina
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bcin03g08650
Botrytis cinerea
Bcin03g08650
N
PV07_02397
Cladophialophora immunda
PV07_02397
N
CFIO01_09363
Colletotrichum fioriniae
CFIO01_09363
N
CH063_00153
Colletotrichum higginsianum
CH063_00153
N
SBOR_8983
Sclerotinia borealis
SBOR_8983
N
TRIATDRAFT_166394
Trichoderma atroviride
TRIATDRAFT_166394
N
TRIVIDRAFT_152535
Trichoderma virens
TRIVIDRAFT_152535
N