Kpol_397p4 (Vanderwaltozyma polyspora)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Kpol_397p4 T254502_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.771 0.771
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.771 0.771
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO15145 MADS box 10 57

Links

Other MADS box family TFs
Other Vanderwaltozyma polyspora TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_05586 Ancylostoma caninum ANCCAN_05586 N 0.000
ANCCEY_05896 Ancylostoma ceylanicum ANCCEY_05896 N 0.000
DICVIV_10864 Dictyocaulus viviparus DICVIV_10864 N 0.000
HPLM_0000159901 Haemonchus placei HPLM_0000159901 N 0.000
HPBE_0001958101 Heligmosomoides bakeri HPBE_0001958101 N 0.000
NBR_0001149301 Nippostrongylus brasiliensis NBR_0001149301 N 0.000
SVUK_0000060801 Strongylus vulgaris SVUK_0000060801 N 0.000
TELCIR_11807 Teladorsagia circumcincta TELCIR_11807 N 0.000