NCAS_0A12960 (Naumovozyma castellii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 NCAS_0A12960 T254853_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG80
M08426_2.00 		Saccharomyces cerevisiae
WGACDC
GHGTCW		 ChIP-chip
Mathelier et al.(2014)
MA0271.1 		0.917 0.917
ARG80
M08588_2.00 		Saccharomyces cerevisiae
NNDVCBNVBDNGRHAR
YTDYCNHVBNVGBHNN		 Misc
DeBoer et al.(2011)
YMR042W_1483 		0.917 0.917
ARG80
M10989_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRI_01 		0.917 0.917
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.792 0.792
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.792 0.792
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.792 0.792
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.792 0.792
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.792 0.792
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC67854 MADS box 127 174

Links

Other MADS box family TFs
Other Naumovozyma castellii TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004093 Ailuropoda melanoleuca ENSAMEG00000004093 N
ENSP00000333920-D1 Bos grunniens ENSP00000333920-D1 N
TTF1 Bos taurus ENSBTAG00000018710 N
TTF1 Callithrix jacchus ENSCJAG00000018230 N
TTF1 Canis familiaris ENSCAFG00000019895 N
ENSCPOG00000021944 Cavia porcellus ENSCPOG00000021944 N
ENSCSAG00000014926 Chlorocebus sabaeus ENSCSAG00000014926 N
TTF1 Dasypus novemcinctus ENSDNOG00000014161 N
ENSDORG00000005337 Dipodomys ordii ENSDORG00000005337 N
ENSECAG00000026979 Equus caballus ENSECAG00000026979 N
TTF1 Felis catus ENSFCAG00000007103 N
TTF1 Gorilla gorilla ENSGGOG00000008285 N
TTF1 Homo sapiens ENSG00000125482 N
ENSSTOG00000007957 Ictidomys tridecemlineatus ENSSTOG00000007957 N
TTF1 Loxodonta africana ENSLAFG00000001119 N
ENSP00000333920 Macaca fascicularis ENSP00000333920 N
TTF1 Macaca mulatta ENSMMUG00000006833 N
TTF1 Monodelphis domestica ENSMODG00000012538 N
ENSMPUG00000012536 Mustela putorius furo ENSMPUG00000012536 N
TTF1 Myotis lucifugus ENSMLUG00000004861 N
ENSNLEG00000012847 Nomascus leucogenys ENSNLEG00000012847 N
TTF1 Ochotona princeps ENSOPRG00000007202 N
TTF1 Oryctolagus cuniculus ENSOCUG00000005633 N
TTF1 Otolemur garnettii ENSOGAG00000009611 N
ENSOARG00000006189 Ovis aries ENSOARG00000006189 N
TTF1 Pan troglodytes ENSPTRG00000021496 N
ENSPPYG00000019709 Pongo abelii ENSPPYG00000019709 N
TTF1 Procavia capensis ENSPCAG00000013797 N
TTF1 Pteropus vampyrus ENSPVAG00000002038 N
Ttf1 Rattus norvegicus ENSRNOG00000039777 N
ENSSHAG00000018686 Sarcophilus harrisii ENSSHAG00000018686 N
ENSTSYG00000012768 Tarsius syrichta ENSTSYG00000012768 N
TTF1 Tursiops truncatus ENSTTRG00000014081 N