NCAS_0B02030 (Naumovozyma castellii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 NCAS_0B02030 T254855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.708 0.708
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC68287 MADS box 10 57

Links

Other MADS box family TFs
Other Naumovozyma castellii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31528 Aegilops tauschii F775_31528 N 0.000
BRADI2G06790 Brachypodium distachyon BRADI2G06790 N 0.000
BRADI2G50220 Brachypodium distachyon BRADI2G50220 N 0.000
BRADI3G09340 Brachypodium distachyon BRADI3G09340 N 0.000
MLOC_72368 Hordeum vulgare MLOC_72368 N 0.000
MLOC_39203 Hordeum vulgare MLOC_39203 N 0.000
LPERR01G26930 Leersia perrieri LPERR01G26930 N 0.000
LPERR01G06720 Leersia perrieri LPERR01G06720 N 0.000
GSMUA_Achr6G26930_001 Musa acuminata GSMUA_Achr6G26930_001 N 0.000
GSMUA_Achr9G06540_001 Musa acuminata GSMUA_Achr9G06540_001 N 0.000
OBART02G10550 Oryza barthii OBART02G10550 N 0.000
OBART01G31310 Oryza barthii OBART01G31310 N 0.000
OBART01G07120 Oryza barthii OBART01G07120 N 0.000
OB01G17130 Oryza brachyantha OB01G17130 N 0.000
OB01G40300 Oryza brachyantha OB01G40300 N 0.000
ORGLA01G0254900 Oryza glaberrima ORGLA01G0254900 N 0.000
ORGLA02G0094900 Oryza glaberrima ORGLA02G0094900 N 0.000
OGLUM01G08020 Oryza glumaepatula OGLUM01G08020 N 0.000
OGLUM01G35480 Oryza glumaepatula OGLUM01G35480 N 0.000
OGLUM02G10470 Oryza glumaepatula OGLUM02G10470 N 0.000
BGIOSGA004481 Oryza indica BGIOSGA004481 N 0.000
BGIOSGA007886 Oryza indica BGIOSGA007886 N 0.000
OLONG_003093 Oryza longistaminata OLONG_003093 N 0.000
OLONG_014610 Oryza longistaminata OLONG_014610 N 0.000
OMERI01G28450 Oryza meridionalis OMERI01G28450 N 0.000
OMERI02G11410 Oryza meridionalis OMERI02G11410 N 0.000
ONIVA02G11660 Oryza nivara ONIVA02G11660 N 0.000
ONIVA01G35770 Oryza nivara ONIVA01G35770 N 0.000
ONIVA01G09160 Oryza nivara ONIVA01G09160 N 0.000
OPUNC01G06850 Oryza punctata OPUNC01G06850 N 0.000
OPUNC01G30390 Oryza punctata OPUNC01G30390 N 0.000
OPUNC02G09400 Oryza punctata OPUNC02G09400 N 0.000
ORUFI01G07680 Oryza rufipogon ORUFI01G07680 N 0.000
ORUFI01G34500 Oryza rufipogon ORUFI01G34500 N 0.000
ORUFI02G10470 Oryza rufipogon ORUFI02G10470 N 0.000
BZIP06 Oryza sativa OS01G0756200 N 0.000
BZIP02 Oryza sativa OS01G0211800 N 0.000
Pavir.J11397 Panicum virgatum Pavir.J11397 N 0.000
Pavir.Aa02794 Panicum virgatum Pavir.Aa02794 N 0.000
Pavir.Ab01112 Panicum virgatum Pavir.Ab01112 N 0.000
Pavir.Ea02752 Panicum virgatum Pavir.Ea02752 N 0.000
Pavir.Eb03400 Panicum virgatum Pavir.Eb03400 N 0.000
Pavir.J05339 Panicum virgatum Pavir.J05339 N 0.000
Si002311m.g Setaria italica Si002311m.g N 0.000
Si002546m.g Setaria italica Si002546m.g N 0.000
Si018161m.g Setaria italica Si018161m.g N 0.000
Sb04g008840 Sorghum bicolor Sb04g008840 N 0.000
Sb03g034950 Sorghum bicolor Sb03g034950 N 0.000
Sb03g002050 Sorghum bicolor Sb03g002050 N 0.000
Traes_2BS_C9A338257 Triticum aestivum Traes_2BS_C9A338257 N 0.000
TRAES3BF093300030CFD_g Triticum aestivum TRAES3BF093300030CFD_g N 0.000
Traes_5BL_573ABF1D7 Triticum aestivum Traes_5BL_573ABF1D7 N 0.000
Traes_5DL_D30ADBFDE Triticum aestivum Traes_5DL_D30ADBFDE N 0.000
TRIUR3_19907 Triticum urartu TRIUR3_19907 N 0.000
GRMZM2G027976 Zea mays GRMZM2G027976 N 0.000
GRMZM2G158313 Zea mays GRMZM2G158313 N 0.000
GRMZM2G170079 Zea mays GRMZM2G170079 N 0.000
AC233853.1_FG002 Zea mays AC233853.1_FG002 N 0.000