CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OB01G21760
(
Oryza brachyantha
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OB01G21760
T254881_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB01G21760.1
MADS box
10
55
RIVKDSTRRLTLKKRRKGLIKKAGELASLCGIGVCVVVYGEEEVHP
Links
Other
MADS box
family TFs
Other
Oryza brachyantha
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR01G11040
Leersia perrieri
LPERR01G11040
N
0.826
OBART01G12040
Oryza barthii
OBART01G12040
N
0.783
ORGLA01G0101600
Oryza glaberrima
ORGLA01G0101600
N
0.783
OGLUM01G13480
Oryza glumaepatula
OGLUM01G13480
N
0.783
BGIOSGA003303
Oryza indica
BGIOSGA003303
N
0.783
ONIVA01G14270
Oryza nivara
ONIVA01G14270
N
0.783
OPUNC01G11720
Oryza punctata
OPUNC01G11720
N
0.848
ORUFI01G13010
Oryza rufipogon
ORUFI01G13010
N
0.783