CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM03G25150
(
Oryza glumaepatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OGLUM03G25150
T255039_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM03G25150.1
MADS box
10
56
RIINDAKRRATFKKRLKGLMKKASELATLCSVDTCLMVYGEGEAQAT
Links
Other
MADS box
family TFs
Other
Oryza glumaepatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_19464
Aegilops tauschii
F775_19464
N
W97_08509
Coniosporium apollinis
W97_08509
N
gene30482-v1.0-hybrid
Fragaria vesca
gene30482-v1.0-hybrid
N
GUITHDRAFT_45285
Guillardia theta
GUITHDRAFT_45285
N
GUITHDRAFT_46005
Guillardia theta
GUITHDRAFT_46005
N
EDP44665.1
Malassezia globosa
EDP44665.1
N
Tgif2lx1
Mus musculus
ENSMUSG00000100133
N
Tgif2lx2
Mus musculus
ENSMUSG00000100194
N
NAPIS_ORF00600
Nosema apis
NAPIS_ORF00600
N
Phatr3_EG02213
Phaeodactylum tricornutum
Phatr3_EG02213
N
SCHCODRAFT_269858
Schizophyllum commune
SCHCODRAFT_269858
N
Thaps269690
Thalassiosira pseudonana
Thaps269690
N
Traes_1AS_306BB8CFE
Triticum aestivum
Traes_1AS_306BB8CFE
N
Traes_1BS_C5E6FB087
Triticum aestivum
Traes_1BS_C5E6FB087
N
Traes_1DS_91D14CD7B
Triticum aestivum
Traes_1DS_91D14CD7B
N