OGLUM06G28660 (Oryza glumaepatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OGLUM06G28660 T255064_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS16
M10971_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS16_01 		1.000 1.000
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.812 0.812
AP3
M08146_2.00 		Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW		 ChIP-seq
Mathelier et al.(2014)
MA0556.1 		0.771 0.771
AP3
M10919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSB_Q2 		0.771 0.771
Q8VWZ4_MALDO
M11026_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS13_01 		0.729 0.729
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.708 0.708
SVP
M06984_2.00 		Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH		 Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b 		0.708 0.708
SVP
M06985_2.00 		Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG		 Dap-seq
OMalley et al.(2016)
SVP_col_v3b 		0.708 0.708
SVP
M08424_2.00 		Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN		 ChIP-chip
Mathelier et al.(2014)
MA0555.1 		0.708 0.708
FBP1_PETHY
M10996_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP1_01 		0.708 0.708
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.708 0.708
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G28660.1 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza glumaepatula TFs

308 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_024750 Acremonium chrysogenum ACRE_024750 I 0.000
ARB_03062 Arthroderma benhamiae ARB_03062 I 0.000
MCYG_03687 Arthroderma otae MCYG_03687 I 0.000
e_gw1.00129.92.1 Aspergillus carbonarius e_gw1.00129.92.1 I 0.000
ACLA_014560 Aspergillus clavatus CADACLAG00001544 I 0.000
CADAFLAG00007151 Aspergillus flavus CADAFLAG00007151 I 0.000
AFUA_5G11470 Aspergillus fumigatus CADAFUAG00006229 I 0.000
ANIA_00153 Aspergillus nidulans CADANIAG00002587 I 0.000
CADANGAG00014086 Aspergillus niger CADANGAG00014086 I 0.000
CADAORAG00008692 Aspergillus oryzae CADAORAG00008692 I 0.000
EURHEDRAFT_413580 Aspergillus ruber EURHEDRAFT_413580 I 0.000
ATEG_02122 Aspergillus terreus CADATEAG00007686 I 0.000
M437DRAFT_82809 Aureobasidium melanogenum M437DRAFT_82809 I 0.000
M438DRAFT_210637 Aureobasidium pullulans M438DRAFT_210637 I 0.000
AUEXF2481DRAFT_30284 Aureobasidium subglaciale AUEXF2481DRAFT_30284 I 0.000
BAUCODRAFT_299844 Baudoinia compniacensis BAUCODRAFT_299844 I 0.000
BBA_03081 Beauveria bassiana BBA_03081 I 0.000
BDDG_04612 Blastomyces dermatitidis BDDG_04612 I 0.000
Bcin13g05820 Botrytis cinerea Bcin13g05820 I 0.000
PVAR5_5799 Byssochlamys spectabilis PVAR5_5799 I 0.000
A1O1_02754 Capronia coronata A1O1_02754 I 0.000
A1O3_05331 Capronia epimyces A1O3_05331 I 0.000
CHGG_08140 Chaetomium globosum CHGG_08140 I 0.000
CTHT_0006580 Chaetomium thermophilum CTHT_0006580 I 0.000
Z519_01789 Cladophialophora bantiana Z519_01789 I 0.000
PV07_00800 Cladophialophora immunda PV07_00800 I 0.000
A1O5_01628 Cladophialophora psammophila A1O5_01628 I 0.000
CPUR_04244 Claviceps purpurea CPUR_04244 I 0.000
CIMG_09151 Coccidioides immitis CIMG_09151 I 0.000
CPC735_015700 Coccidioides posadasii CPC735_015700 I 0.000
CFIO01_12709 Colletotrichum fioriniae CFIO01_12709 I 0.000
CGGC5_3541 Colletotrichum gloeosporioides CGGC5_3541 I 0.000
GLRG_10324 Colletotrichum graminicola GLRG_10324 I 0.000
CH063_13383 Colletotrichum higginsianum CH063_13383 I 0.000
Cob_04192 Colletotrichum orbiculare Cob_04192 I 0.000
CSUB01_08817 Colletotrichum sublineola CSUB01_08817 I 0.000
W97_00524 Coniosporium apollinis W97_00524 I 0.000
CCM_04428 Cordyceps militaris CCM_04428 I 0.000
DOTSEDRAFT_74578 Dothistroma septosporum DOTSEDRAFT_74578 I 0.000
EPUS_02713 Endocarpon pusillum EPUS_02713 I 0.000
A1O9_10943 Exophiala aquamarina A1O9_10943 I 0.000
HMPREF1120_07251 Exophiala dermatitidis HMPREF1120_07251 I 0.000
PV10_05034 Exophiala mesophila PV10_05034 I 0.000
PV06_05014 Exophiala oligosperma PV06_05014 I 0.000
PV11_02787 Exophiala sideris PV11_02787 I 0.000
PV08_09181 Exophiala spinifera PV08_09181 I 0.000
PV05_00945 Exophiala xenobiotica PV05_00945 I 0.000
Z517_05238 Fonsecaea pedrosoi Z517_05238 I 0.000
FFUJ_01666 Fusarium fujikuroi FFUJ_01666 I 0.000
FGRRES_01457 Fusarium graminearum FGRRES_01457 I 0.000
FOXG_11256 Fusarium oxysporum FOXG_11256 I 0.000
FPSE_08494 Fusarium pseudograminearum FPSE_08494 I 0.000
NechaG65268 Fusarium solani NechaG65268 I 0.000
FVEG_09538 Fusarium verticillioides FVEG_09538 I 0.000
GGTG_04412 Gaeumannomyces graminis GGTG_04412 I 0.000
CMQ_6626 Grosmannia clavigera CMQ_6626 I 0.000
HCBG_04832 Histoplasma capsulatum HCBG_04832 I 0.000
MPH_03415 Macrophomina phaseolina MPH_03415 I 0.000
MGG_03899 Magnaporthe oryzae MGG_03899 I 0.000
MAPG_08374 Magnaporthe poae MAPG_08374 I 0.000
MBM_09576 Marssonina brunnea MBM_09576 I 0.000
MAC_00059 Metarhizium acridum MAC_00059 I 0.000
MAM_04029 Metarhizium album MAM_04029 I 0.000
MANI_110739 Metarhizium anisopliae MANI_110739 I 0.000
MBR_06871 Metarhizium brunneum MBR_06871 I 0.000
MGU_04495 Metarhizium guizhouense MGU_04495 I 0.000
MAJ_00559 Metarhizium majus MAJ_00559 I 0.000
X797_000096 Metarhizium robertsii X797_000096 I 0.000
MCYG_03687 Microsporum canis MCYG_03687 I 0.000
MGYG_03272 Microsporum gypseum MGYG_03272 I 0.000
MYCTH_2311569 Myceliophthora thermophila MYCTH_2311569 I 0.000
estExt_fgenesh1_pg.C_100179 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_100179 I 0.000
estExt_Genewise1Plus.C_sca_8_chr1_1_00667 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00667 I 0.000
NFIA_075780 Neosartorya fischeri CADNFIAG00007056 I 0.000
NCU03416 Neurospora crassa NCU03416 D 0.000
estExt_fgenesh3_pm.C_160040 Neurospora discreta estExt_fgenesh3_pm.C_160040 I 0.000
NEUTE1DRAFT_130751 Neurospora tetrasperma NEUTE1DRAFT_130751 I 0.000
OIDMADRAFT_145587 Oidiodendron maius OIDMADRAFT_145587 I 0.000
F503_00478 Ophiostoma piceae uamh F503_00478 I 0.000
PABG_04882 Paracoccidioides brasiliensis PABG_04882 I 0.000
PAAG_02388 Paracoccidioides sp lutzii PAAG_02388 I 0.000
Pc21g06350 Penicillium chrysogenum Pc21g06350 I 0.000
PDIP_60380 Penicillium digitatum PDIP_60380 I 0.000
PEX1_062800 Penicillium expansum PEX1_062800 I 0.000
PITC_074360 Penicillium italicum PITC_074360 I 0.000
PMAA_032500 Penicillium marneffei PMAA_032500 I 0.000
PDE_07546 Penicillium oxalicum PDE_07546 I 0.000
PCH_Pc21g06350 Penicillium rubens PCH_Pc21g06350 I 0.000
U727_00434220251 Penicillium solitum U727_00434220251 I 0.000
PFICI_03401 Pestalotiopsis fici PFICI_03401 I 0.000
PredSwiss_ASS2010_819.2 Pneumocystis carinii PredSwiss_ASS2010_819.2 I 0.000
PredSwiss_CON609.2 Pneumocystis carinii PredSwiss_CON609.2 I 0.000
PNEG_01035 Pneumocystis murina PNEG_01035 I 0.000
PODANS_6_4980 Podospora anserina PODANS_6_4980 I 0.000
MYCFIDRAFT_208965 Pseudocercospora fijiensis MYCFIDRAFT_208965 I 0.000
GMDG_05202 Pseudogymnoascus destructans GMDG_05202 I 0.000
V499_08943 Pseudogymnoascus pannorum V499_08943 I 0.000
Z518_10910 Rhinocladiella mackenziei Z518_10910 I 0.000
SAPIO_CDS6637 Scedosporium apiospermum SAPIO_CDS6637 I 0.000
SBOR_6777 Sclerotinia borealis SBOR_6777 I 0.000
SS1G_13379 Sclerotinia sclerotiorum SS1G_13379 I 0.000
SMAC_08867 Sordaria macrospora SMAC_08867 I 0.000
SEPMUDRAFT_72060 Sphaerulina musiva SEPMUDRAFT_72060 I 0.000
SPBR_04035 Sporothrix brasiliensis SPBR_04035 I 0.000
HMPREF1624_08649 Sporothrix schenckii HMPREF1624_08649 I 0.000
S40288_06407 Stachybotrys chartarum S40288_06407 I 0.000
S40285_06364 Stachybotrys chlorohalonata S40285_06364 I 0.000
PMAA_032500 Talaromyces marneffei PMAA_032500 I 0.000
TSTA_065060 Talaromyces stipitatus TSTA_065060 I 0.000
THITE_2123169 Thielavia terrestris THITE_2123169 I 0.000
UCRPA7_862 Togninia minima UCRPA7_862 I 0.000
TRIREDRAFT_108208 Trichoderma reesei TRIREDRAFT_108208 I 0.000
TRIVIDRAFT_65219 Trichoderma virens TRIVIDRAFT_65219 I 0.000
TEQG_03884 Trichophyton equinum TEQG_03884 I 0.000
H101_05026 Trichophyton interdigitale H101_05026 I 0.000
H102_03768 Trichophyton rubrum H102_03768 I 0.000
H105_03796 Trichophyton soudanense H105_03796 I 0.000
TESG_04989 Trichophyton tonsurans TESG_04989 I 0.000
TRV_06090 Trichophyton verrucosum TRV_06090 I 0.000
GSTUM_00010922001 Tuber melanosporum GSTUM_00010922001 I 0.000
UREG_05200 Uncinocarpus reesii UREG_05200 I 0.000
UV8b_2224 Ustilaginoidea virens UV8b_2224 I 0.000
PV09_02970 Verruconis gallopava PV09_02970 I 0.000
VDAG_02014 Verticillium dahliae VDAG_02014 I 0.000