CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OLONG_012664
(
Oryza longistaminata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OLONG_012664
T255127_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_012664-R1
MADS box
19
66
RIDNKERRQVTFTKRRGGLFKKASELALLTGAGVAVIVFSPAKHVYAF
Links
Other
MADS box
family TFs
Other
Oryza longistaminata
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.200709
Amphimedon queenslandica
Aqu1.200709
I
0.000
Cmyd_10005683
Chelonia mydas
Cmyd_10005683
I
0.000
CAD26043
Encephalitozoon cuniculi
CAD26043
I
0.000
EHEL_111220
Encephalitozoon hellem
EHEL_111220
I
0.000
Eint_111220
Encephalitozoon intestinalis
Eint_111220
I
0.000
EROM_111220
Encephalitozoon romaleae
EROM_111220
I
0.000
PV10_05533
Exophiala mesophila
PV10_05533
N
0.000
HDID_0000998001
Hymenolepis diminuta
HDID_0000998001
I
0.000
M896_121210
Ordospora colligata
M896_121210
I
0.000
ENSONIG00000003229
Oreochromis niloticus
ENSONIG00000003229
I
0.000
ENSPSIG00000017578
Pelodiscus sinensis
ENSPSIG00000017578
I
0.000
Pvit_18984
Pogona vitticeps
Pvit_18984
N
0.000
PXEA_0001911301
Protopolystoma xenopodis
PXEA_0001911301
I
0.000
PTSG_00936
Salpingoeca rosetta
PTSG_00936
N
0.000
ENSSHAG00000017137
Sarcophilus harrisii
ENSSHAG00000017137
I
0.000
SLOPH_371
Spraguea lophii
SLOPH_371
N
0.000
THOM_3093
Trachipleistophora hominis
THOM_3093
N
0.000
VCUG_01729
Vavraia culicis
VCUG_01729
N
0.000
VICG_01965
Vittaforma corneae
VICG_01965
N
0.000