ONIVA12G13220 (Oryza nivara)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ONIVA12G13220 T255284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ATE2_PETHY
M11007_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP29_01 		0.812 0.812
Q7X9I6_MALDO
M11023_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS12_02 		0.771 0.771
MADS15
M10972_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_01 		0.771 0.771
O82695_MALDO
M11019_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS5_01 		0.771 0.771
squamosa
M02697_2.00 		Antirrhinum majus
MYAWAWAWRGHAAN
NTTDCYWTWTWTRK		 SELEX
Mathelier et al.(2014)
MA0082.1 		0.750 0.750
AP1
M08144_2.00 		Arabidopsis thaliana
MYAAAAAWRGAAA
TTTCYWTTTTTRK		 ChIP-seq
Mathelier et al.(2014)
MA0940.1 		0.750 0.750
Q9LEI3_HORVU
M10985_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM3_01 		0.750 0.750
MLOC_61901
M10964_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM8_01 		0.750 0.750
Q8GT99_TOBAC
M11006_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_02 		0.750 0.750
MADS18
M10973_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS18_01 		0.750 0.750
Q9FR84_MAIZE
M10981_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_03 		0.750 0.750
AP1
M10905_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSA_Q2 		0.750 0.750
Q9SBQ1_PETHY
M11017_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PFG_01 		0.750 0.750
Q38742_ANTMA
M11000_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SQUA_01 		0.750 0.750
Q41829_MAIZE
M10977_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_02 		0.750 0.750
AGL15
M06992_2.00 		Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN
NTTTCYWHWTTDGGWAANW		 Dap-seq
OMalley et al.(2016)
AGL15_col_a 		0.729 0.729
AGL15
M06993_2.00 		Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH
DDNTTTCYHHWTTDGGWAANH		 Dap-seq
OMalley et al.(2016)
AGL15_colamp_a 		0.729 0.729
AGL15
M10927_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_01 		0.729 0.729
AGL15
M10928_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_02 		0.729 0.729
Q9ZRA5_MALDO
M11030_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_04 		0.729 0.729
MAD14_ORYSJ
M10960_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA12G13220.1 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza nivara TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010404 Ailuropoda melanoleuca ENSAMEG00000010404 N 0.000
ENSBTAP00000007769-D1 Bos grunniens ENSBTAP00000007769-D1 N 0.000
ADNP2 Bos taurus ENSBTAG00000005916 N 0.000
ADNP2 Callithrix jacchus ENSCJAG00000010119 N 0.000
ADNP2 Canis familiaris ENSCAFG00000000007 N 0.000
ENSCSAG00000018257 Chlorocebus sabaeus ENSCSAG00000018257 N 0.000
ADNP2 Choloepus hoffmanni ENSCHOG00000012944 N 0.000
ADNP2 Dasypus novemcinctus ENSDNOG00000003747 N 0.000
ADNP2 Equus caballus ENSECAG00000008310 N 0.000
ADNP2 Felis catus ENSFCAG00000022677 N 0.000
ADNP2 Gorilla gorilla ENSGGOG00000003551 N 0.000
ADNP2 Homo sapiens ENSG00000101544 N 0.000
ADNP2 Loxodonta africana ENSLAFG00000001597 N 0.000
ENSMMUP00000018027 Macaca fascicularis ENSMMUP00000018027 N 0.000
ADNP2 Macaca mulatta ENSMMUG00000013710 N 0.000
ENSMEUG00000007373 Macropus eugenii ENSMEUG00000007373 N 0.000
ADNP2 Monodelphis domestica ENSMODG00000011929 N 0.000
ENSMPUG00000016665 Mustela putorius furo ENSMPUG00000016665 N 0.000
Myotis_brandtii_ADNP2_10034220 Myotis brandtii Myotis_brandtii_ADNP2_10034220 N 0.000
ADNP2 Myotis lucifugus ENSMLUG00000006751 N 0.000
ENSNLEG00000008406 Nomascus leucogenys ENSNLEG00000008406 N 0.000
ADNP2 Ochotona princeps ENSOPRG00000000455 N 0.000
ADNP2 Oryctolagus cuniculus ENSOCUG00000009233 N 0.000
ENSOARG00000004037 Ovis aries ENSOARG00000004037 N 0.000
ADNP2 Pan troglodytes ENSPTRG00000010138 N 0.000
ENSPANG00000011713 Papio anubis ENSPANG00000011713 N 0.000
ENSPPYG00000009265 Pongo abelii ENSPPYG00000009265 N 0.000
ADNP2 Pteropus vampyrus ENSPVAG00000009159 N 0.000
ENSSHAG00000005235 Sarcophilus harrisii ENSSHAG00000005235 N 0.000
ENSSSCG00000005774 Sus scrofa ENSSSCG00000005774 N 0.000
ADNP2 Tupaia belangeri ENSTBEG00000001298 N 0.000
ADNP2 Tursiops truncatus ENSTTRG00000002400 N 0.000
ADNP2 Vicugna pacos ENSVPAG00000001203 N 0.000