CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC12G08600
(
Oryza punctata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OPUNC12G08600
T255351_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC12G08600.1
MADS box
19
66
RIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSEANHTYAF
Links
Other
MADS box
family TFs
Other
Oryza punctata
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000013404
Ailuropoda melanoleuca
ENSAMEG00000013404
N
0.000
ENSAPLG00000010567
Anas platyrhynchos
ENSAPLG00000010567
N
0.000
ARID2
Anolis carolinensis
ENSACAG00000002402
N
0.000
Afo_R010305
Aptenodytes forsteri
Afo_R010305
N
0.000
ENSAMXG00000012189
Astyanax mexicanus
ENSAMXG00000012189
N
0.000
Brh_R012991
Buceros rhinoceros
Brh_R012991
N
0.000
ARID2
Callithrix jacchus
ENSCJAG00000013099
N
0.000
Aan_R012350
Calypte anna
Aan_R012350
N
0.000
ARID2
Canis familiaris
ENSCAFG00000009335
N
0.000
arid2
Danio rerio
ENSDARG00000007413
N
0.000
ARID2
Felis catus
ENSFCAG00000012831
N
0.000
ENSFALG00000010156
Ficedula albicollis
ENSFALG00000010156
N
0.000
ENSGMOG00000016013
Gadus morhua
ENSGMOG00000016013
N
0.000
ENSGALG00000009665
Gallus gallus
ENSGALG00000009665
N
0.000
arid2
Gasterosteus aculeatus
ENSGACG00000019522
N
0.000
Gfo_R004053
Geospiza fortis
Gfo_R004053
N
0.000
ARID2
Gorilla gorilla
ENSGGOG00000013896
N
0.000
ARID2
Homo sapiens
ENSG00000189079
N
0.000
ENSSTOG00000008936
Ictidomys tridecemlineatus
ENSSTOG00000008936
N
0.000
ENSLOCG00000016423
Lepisosteus oculatus
ENSLOCG00000016423
N
0.000
ARID2
Meleagris gallopavo
ENSMGAG00000009656
N
0.000
ENSMPUG00000000380
Mustela putorius furo
ENSMPUG00000000380
N
0.000
Arid2
Mus musculus
ENSMUSG00000033237
I
0.000
ENSNLEG00000017919
Nomascus leucogenys
ENSNLEG00000017919
N
0.000
Ogr00113
Ophisaurus gracilis
Ogr00113
N
0.000
ENSONIG00000011901
Oreochromis niloticus
ENSONIG00000011901
N
0.000
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.000
ENSOARG00000019554
Ovis aries
ENSOARG00000019554
N
0.000
ARID2
Pan troglodytes
ENSPTRG00000004853
N
0.000
ENSPSIG00000006686
Pelodiscus sinensis
ENSPSIG00000006686
N
0.000
ENSPFOG00000011270
Poecilia formosa
ENSPFOG00000011270
N
0.000
Pvit_11514
Pogona vitticeps
Pvit_11514
N
0.000
ENSPPYG00000004433
Pongo abelii
ENSPPYG00000004433
N
0.000
ARID2
Procavia capensis
ENSPCAG00000015312
N
0.000
Arid2
Rattus norvegicus
ENSRNOG00000004831
N
0.000
arid2
Takifugu rubripes
ENSTRUG00000004073
N
0.000
arid2
Tetraodon nigroviridis
ENSTNIG00000005771
N
0.000
arid2
Xenopus tropicalis
XB-GENE-6070950
N
0.000