CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA03G0226500
(
Oryza glaberrima
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ORGLA03G0226500
T255378_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0226500.1
MADS box
10
56
RIINDAKRRATFKKRLKGLMKKASELATLCSVDTCLMVYGEGEAQAT
Links
Other
MADS box
family TFs
Other
Oryza glaberrima
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_062880
Acremonium chrysogenum
ACRE_062880
I
0.000
COCC4DRAFT_21340
Bipolaris maydis
COCC4DRAFT_21340
N
0.000
COCMIDRAFT_89716
Bipolaris oryzae
COCMIDRAFT_89716
N
0.000
COCSADRAFT_92985
Bipolaris sorokiniana
COCSADRAFT_92985
N
0.000
COCVIDRAFT_94504
Bipolaris victoriae
COCVIDRAFT_94504
N
0.000
COCCADRAFT_1690
Bipolaris zeicola
COCCADRAFT_1690
N
0.000
estExt_fgenesh1_pg.C_30275
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_30275
N
0.000
CGGC5_7534
Colletotrichum gloeosporioides
CGGC5_7534
I
0.000
GLRG_01353
Colletotrichum graminicola
GLRG_01353
I
0.000
CH063_11966
Colletotrichum higginsianum
CH063_11966
I
0.000
Cob_12403
Colletotrichum orbiculare
Cob_12403
I
0.000
CSUB01_03595
Colletotrichum sublineola
CSUB01_03595
I
0.000
W97_01077
Coniosporium apollinis
W97_01077
I
0.000
FGRRES_00515
Fusarium graminearum
FGRRES_00515
I
0.000
FPSE_04421
Fusarium pseudograminearum
FPSE_04421
I
0.000
CMQ_48
Grosmannia clavigera
CMQ_48
I
0.000
MPH_00439
Macrophomina phaseolina
MPH_00439
I
0.000
MAC_02987
Metarhizium acridum
MAC_02987
I
0.000
MYCTH_2297012
Myceliophthora thermophila
MYCTH_2297012
I
0.000
UCRNP2_4189
Neofusicoccum parvum
UCRNP2_4189
I
0.000
PTT_12768
Pyrenophora teres
PTT_12768
N
0.000
PTRG_07536
Pyrenophora triticirepentis
PTRG_07536
N
0.000
SETTUDRAFT_28486
Setosphaeria turcica
SETTUDRAFT_28486
N
0.000
SNOG_04486
Stagonospora nodorum
SNOG_04486
I
0.000
THITE_2112457
Thielavia terrestris
THITE_2112457
I
0.000
UCRPA7_6727
Togninia minima
UCRPA7_6727
I
0.000
TRIREDRAFT_73654
Trichoderma reesei
TRIREDRAFT_73654
I
0.000
TRIVIDRAFT_212339
Trichoderma virens
TRIVIDRAFT_212339
I
0.000
UV8b_4299
Ustilaginoidea virens
UV8b_4299
I
0.000