scaffold_302326.1 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 scaffold_302326.1 T256116_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_302326.1 MADS box 15 62

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.C_scaffold_1003053 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003053 N 0.000
LjSGA_065309.1 Lotus japonicus LjSGA_065309.1 N 0.000
MDP0000205568 Malus domestica MDP0000205568 N 0.000
MDP0000403071 Malus domestica MDP0000403071 N 0.000
OLONG_019147 Oryza longistaminata OLONG_019147 N 0.000
ORUFI11G01560 Oryza rufipogon ORUFI11G01560 N 0.000
PDK_20s130094267g001 Phoenix dactylifera PDK_20s130094267g001 N 0.000
PGSC0003DMG400028125 Solanum tuberosum PGSC0003DMG400028125 I 0.000
Traes_2AS_239CDF865 Triticum aestivum Traes_2AS_239CDF865 N 0.000