Si019337m.g (Setaria italica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Si019337m.g T256228_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.979 0.979
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.854 0.854
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.854 0.854
Q9ATE8_PETHY
M11011_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP21_01 		0.750 0.750
Q40591_TOBAC
M11002_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_03 		0.750 0.750
AGL1
M02694_2.00 		Arabidopsis thaliana
NDTDCCWWWWNDGGWAHN
NDTWCCHNWWWWGGHAHN		 SELEX
Mathelier et al.(2014)
MA0585.1 		0.729 0.729
AG
M02695_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHADN
NHTDCCHNWTWWGGWAAD		 SELEX
Mathelier et al.(2014)
MA0005.2 		0.729 0.729
SOC1
M08425_2.00 		Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG		 ChIP-chip
Mathelier et al.(2014)
MA0554.1 		0.729 0.729
AG
M10923_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN
NHTDCCHNWTWWGGWAAD		 Transfac
Matys et al.(2006)
P$AG_01 		0.729 0.729
AG
M10924_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_02 		0.729 0.729
AG
M10925_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_03 		0.729 0.729
AG_TOBAC
M10995_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG1_02 		0.729 0.729
AGL1
M10920_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_01 		0.729 0.729
AGL1
M10921_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_02 		0.729 0.729
SOC1
M10915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL20_01 		0.729 0.729
AG
M10926_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_Q2 		0.729 0.729
Q9ATE7_PETHY
M11010_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP22_01 		0.729 0.729
Q9ATE3_PETHY
M11008_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP28_01 		0.729 0.729
Q08711_PETHY
M10999_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP6_01 		0.729 0.729
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.729 0.729
O82698_MALDO
M11021_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS10_01 		0.729 0.729
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.729 0.729
MADS2
M10966_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_02 		0.729 0.729
MADS3_ORYSJ
M10963_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_01 		0.729 0.729
AG_PETHY
M10994_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_02 		0.729 0.729
SHP2
M10914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SHP2_01 		0.729 0.729
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.708 0.708
SVP
M06984_2.00 		Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH		 Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b 		0.708 0.708
SVP
M06985_2.00 		Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG		 Dap-seq
OMalley et al.(2016)
SVP_col_v3b 		0.708 0.708
SVP
M08424_2.00 		Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN		 ChIP-chip
Mathelier et al.(2014)
MA0555.1 		0.708 0.708
Q9ATE9_PETHY
M11012_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP20_01 		0.708 0.708
Q9AR49_MAIZE
M10980_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M29_01 		0.708 0.708
Q8VWZ3_MALDO
M11025_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_02 		0.708 0.708
Q8VWZ2_MALDO
M11024_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_02 		0.708 0.708
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.708 0.708
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si019337m MADS box 10 57

Links

Other MADS box family TFs
Other Setaria italica TFs

973 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_057790 Acremonium chrysogenum ACRE_057790 N
AOL_s00043g47 Arthrobotrys oligospora AOL_s00043g47 N
ARB_06070 Arthroderma benhamiae ARB_06070 N
fgenesh1_pg.00795_#_26 Aspergillus carbonarius fgenesh1_pg.00795_#_26 N
CADAFLAG00013433 Aspergillus flavus CADAFLAG00013433 N
AFUA_4G04502 Aspergillus fumigatus CADAFUAG00001430 N
CADANGAG00010969 Aspergillus niger CADANGAG00010969 N
CADAORAG00012206 Aspergillus oryzae CADAORAG00012206 N
EURHEDRAFT_462177 Aspergillus ruber EURHEDRAFT_462177 N
ATEG_02742 Aspergillus terreus CADATEAG00003788 N
M437DRAFT_56721 Aureobasidium melanogenum M437DRAFT_56721 N
M438DRAFT_272047 Aureobasidium pullulans M438DRAFT_272047 N
AUEXF2481DRAFT_4075 Aureobasidium subglaciale AUEXF2481DRAFT_4075 N
BAUCODRAFT_151200 Baudoinia compniacensis BAUCODRAFT_151200 N
BBA_04216 Beauveria bassiana BBA_04216 N
COCC4DRAFT_137933 Bipolaris maydis COCC4DRAFT_137933 N
COCMIDRAFT_90826 Bipolaris oryzae COCMIDRAFT_90826 N
COCSADRAFT_237465 Bipolaris sorokiniana COCSADRAFT_237465 N
COCVIDRAFT_100540 Bipolaris victoriae COCVIDRAFT_100540 N
COCCADRAFT_23204 Bipolaris zeicola COCCADRAFT_23204 N
BDDG_07871 Blastomyces dermatitidis BDDG_07871 N
BGHDH14_bgh06000 Blumeria graminis BGHDH14_bgh06000 N
Bcin02g02960 Botrytis cinerea Bcin02g02960 N
PVAR5_3532 Byssochlamys spectabilis PVAR5_3532 N
CD36_31370 Candida dubliniensis CD36_31370 N
PGUG_04779 Candida guilliermondii PGUG_04779 I
CLUG_03610 Candida lusitaniae CLUG_03610 I
G210_0510 Candida maltosa G210_0510 I
CANTEDRAFT_132848 Candida tenuis CANTEDRAFT_132848 I
CTRG_00655 Candida tropicalis CTRG_00655 I
A1O1_04043 Capronia coronata A1O1_04043 N
A1O3_01459 Capronia epimyces A1O3_01459 N
PV04_05986 Capronia semiimmersa PV04_05986 N
Z519_07578 Cladophialophora bantiana Z519_07578 N
G647_06910 Cladophialophora carrionii G647_06910 I
PV07_04143 Cladophialophora immunda PV07_04143 N
A1O5_07765 Cladophialophora psammophila A1O5_07765 N
A1O7_05617 Cladophialophora yegresii A1O7_05617 N
CPUR_00409 Claviceps purpurea CPUR_00409 N
CLUG_03610 Clavispora lusitaniae CLUG_03610 I
CIMG_08549 Coccidioides immitis CIMG_08549 N
CPC735_062070 Coccidioides posadasii CPC735_062070 N
estExt_Genewise1Plus.C_50691 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50691 N
CFIO01_04547 Colletotrichum fioriniae CFIO01_04547 N
CGGC5_1651 Colletotrichum gloeosporioides CGGC5_1651 N
GLRG_05271 Colletotrichum graminicola GLRG_05271 N
CH063_04335 Colletotrichum higginsianum CH063_04335 N
Cob_03924 Colletotrichum orbiculare Cob_03924 N
CSUB01_10826 Colletotrichum sublineola CSUB01_10826 N
W97_04615 Coniosporium apollinis W97_04615 N
CCM_02465 Cordyceps militaris CCM_02465 N
estExt_Genewise1Plus.C_21911 Cryphonectria parasitica estExt_Genewise1Plus.C_21911 N
HMPREF1541_00864 Cyphellophora europaea HMPREF1541_00864 N
H072_3239 Dactylellina haptotyla H072_3239 N
DEHA2G10560g Debaryomyces hansenii DEHA2G10560g I
DEHA2G20636g Debaryomyces hansenii DEHA2G20636g I
DOTSEDRAFT_73714 Dothistroma septosporum DOTSEDRAFT_73714 N
DRE_06964 Drechslerella stenobrocha DRE_06964 I
EPUS_01915 Endocarpon pusillum EPUS_01915 N
EV44_g0556 Erysiphe necator EV44_g0556 N
UCREL1_4627 Eutypa lata UCREL1_4627 N
A1O9_03914 Exophiala aquamarina A1O9_03914 N
HMPREF1120_08552 Exophiala dermatitidis HMPREF1120_08552 N
PV10_07698 Exophiala mesophila PV10_07698 N
PV06_00857 Exophiala oligosperma PV06_00857 N
PV11_00595 Exophiala sideris PV11_00595 N
PV08_00880 Exophiala spinifera PV08_00880 N
PV05_05603 Exophiala xenobiotica PV05_05603 N
Z517_00530 Fonsecaea pedrosoi Z517_00530 N
FFUJ_08331 Fusarium fujikuroi FFUJ_08331 N
FGRRES_10868 Fusarium graminearum FGRRES_10868 N
FOXG_12803 Fusarium oxysporum FOXG_12803 N
FPSE_09836 Fusarium pseudograminearum FPSE_09836 N
NechaG40194 Fusarium solani NechaG40194 N
FVEG_11544 Fusarium verticillioides FVEG_11544 N
GGTG_10719 Gaeumannomyces graminis GGTG_10719 N
M7I_3486 Glarea lozoyensis M7I_3486 N
CMQ_3588 Grosmannia clavigera CMQ_3588 N
HCBG_08291 Histoplasma capsulatum HCBG_08291 N
KLLA0_E03191g Kluyveromyces lactis KLLA0_E03191g I
PAS_chr2-1_0026 Komagataella pastoris PAS_chr2-1_0026 I
SAKL0G03586g Lachancea kluyveri SAKL0G03586g I
ENSLACG00000010304 Latimeria chalumnae ENSLACG00000010304 I
LEMA_P076740.1 Leptosphaeria maculans LEMA_P076740.1 N
MPH_02552 Macrophomina phaseolina MPH_02552 N
MGG_06971 Magnaporthe oryzae MGG_06971 N
MAPG_00013 Magnaporthe poae MAPG_00013 N
MBM_05529 Marssonina brunnea MBM_05529 N
MAM_02919 Metarhizium album MAM_02919 N
MANI_027126 Metarhizium anisopliae MANI_027126 N
MBR_04590 Metarhizium brunneum MBR_04590 N
MGU_04157 Metarhizium guizhouense MGU_04157 N
MAJ_01594 Metarhizium majus MAJ_01594 N
X797_007282 Metarhizium robertsii X797_007282 N
PGUG_04779 Meyerozyma guilliermondii PGUG_04779 I
MCYG_02334 Microsporum canis MCYG_02334 N
MGYG_07335 Microsporum gypseum MGYG_07335 N
GNLVRS01_PISO0E07748g Millerozyma farinosa GNLVRS01_PISO0E07748g I
GNLVRS01_PISO0F09091g Millerozyma farinosa GNLVRS01_PISO0F09091g I
E5Q_05471 Mixia osmundae E5Q_05471 I
e_gw1.5.1289.1 Mucor circinelloides e_gw1.5.1289.1 N
fgeneshMC_pg.4_#_769 Mucor circinelloides fgeneshMC_pg.4_#_769 I
MYCTH_2312138 Myceliophthora thermophila MYCTH_2312138 N
gw1.18.319.1 Mycosphaerella fijiensis gw1.18.319.1 N
e_gw1.3.1300.1 Mycosphaerella graminicola e_gw1.3.1300.1 N
NCAS_0H02280 Naumovozyma castellii NCAS_0H02280 I
NDAI_0C01380 Naumovozyma dairenensis NDAI_0C01380 I
e_gw1.12.536.1 Nectria haematococca e_gw1.12.536.1 N
NFIA_028860 Neosartorya fischeri CADNFIAG00002767 N
hsf-2 Neurospora crassa NCU08480 N
estExt_fgenesh2_pg.C_100130 Neurospora discreta estExt_fgenesh2_pg.C_100130 N
OIDMADRAFT_181379 Oidiodendron maius OIDMADRAFT_181379 N
OCS_04575 Ophiocordyceps sinensis OCS_04575 N
F503_06440 Ophiostoma piceae uamh F503_06440 N
PABG_01939 Paracoccidioides brasiliensis PABG_01939 N
PAAG_01459 Paracoccidioides sp lutzii PAAG_01459 N
Pc13g06670 Penicillium chrysogenum Pc13g06670 N
PDIP_15740 Penicillium digitatum PDIP_15740 N
PEX1_020890 Penicillium expansum PEX1_020890 N
PMAA_085950 Penicillium marneffei PMAA_085950 N
PDE_05764 Penicillium oxalicum PDE_05764 N
PCH_Pc13g06670 Penicillium rubens PCH_Pc13g06670 N
U727_0043017041 Penicillium solitum U727_0043017041 N
PFICI_09422 Pestalotiopsis fici PFICI_09422 I
SNOG_08309 Phaeosphaeria nodorum SNOG_08309 I
estExt_Genewise1.C_280011 Phycomyces blakesleeanus estExt_Genewise1.C_280011 N
gw1.54.53.1 Phycomyces blakesleeanus gw1.54.53.1 I
XP_002490906.1 Pichia pastoris XP_002490906.1 I
estExt_fgenesh1_pg.C_chr_6.10474 Pichia stipitis estExt_fgenesh1_pg.C_chr_6.10474 I
PNEG_02594 Pneumocystis murina PNEG_02594 I
PODANS_3_7650 Podospora anserina PODANS_3_7650 N
MYCFIDRAFT_146678 Pseudocercospora fijiensis MYCFIDRAFT_146678 N
GMDG_00035 Pseudogymnoascus destructans GMDG_00035 N
V499_07683 Pseudogymnoascus pannorum V499_07683 N
PSEUBRA_SCAF16g05334 Pseudozyma brasiliensis PSEUBRA_SCAF16g05334 N
PFL1_03124 Pseudozyma flocculosa PFL1_03124 N
PHSY_000528 Pseudozyma hubeiensis PHSY_000528 N
PGTG_02256 Puccinia graminis PGTG_02256 I
PTT_06554 Pyrenophora teres PTT_06554 N
PTRG_08428 Pyrenophora triticirepentis PTRG_08428 N
Z518_08730 Rhinocladiella mackenziei Z518_08730 N
V565_116890 Rhizoctonia solani V565_116890 I
GLOINDRAFT_240353 Rhizophagus irregularis GLOINDRAFT_240353 I
RO3G_03231 Rhizopus oryzae RO3G_03231 N
RO3G_05814 Rhizopus oryzae RO3G_05814 I
RO3G_08485 Rhizopus oryzae RO3G_08485 N
RO3G_15039 Rhizopus oryzae RO3G_15039 N
RO3G_17136 Rhizopus oryzae RO3G_17136 I
Scas_Contig714.29 Saccharomyces castellii Scas_Contig714.29 I
SAPIO_CDS6017 Scedosporium apiospermum SAPIO_CDS6017 N
SAPIO_CDS6018 Scedosporium apiospermum SAPIO_CDS6018 N
PICST_68146 Scheffersomyces stipitis PICST_68146 I
SPOG_01941 Schizosaccharomyces cryophilus SPOG_01941 I
SJAG_04388 Schizosaccharomyces japonicus SJAG_04388 I
SOCG_00564 Schizosaccharomyces octosporus SOCG_00564 I
hsf1 Schizosaccharomyces pombe SPAC2E12.02 I
SBOR_3380 Sclerotinia borealis SBOR_3380 N
SS1G_01646 Sclerotinia sclerotiorum SS1G_01646 N
SETTUDRAFT_34274 Setosphaeria turcica SETTUDRAFT_34274 N
SMAC_00003 Sordaria macrospora SMAC_00003 N
SEPMUDRAFT_47596 Sphaerulina musiva SEPMUDRAFT_47596 N
SPPG_01116 Spizellomyces punctatus SPPG_01116 I
SPPG_03494 Spizellomyces punctatus SPPG_03494 N
SPPG_05445 Spizellomyces punctatus SPPG_05445 I
SPPG_07283 Spizellomyces punctatus SPPG_07283 I
sr13089 Sporisorium reilianum sr13089 N
SPBR_01490 Sporothrix brasiliensis SPBR_01490 N
HMPREF1624_03486 Sporothrix schenckii HMPREF1624_03486 N
S40288_00568 Stachybotrys chartarum S40288_00568 N
S40285_02996 Stachybotrys chlorohalonata S40285_02996 N
SNOG_08309 Stagonospora nodorum SNOG_08309 N
PMAA_085950 Talaromyces marneffei PMAA_085950 N
TSTA_121070 Talaromyces stipitatus TSTA_121070 N
THITE_2123849 Thielavia terrestris THITE_2123849 N
UCRPA7_905 Togninia minima UCRPA7_905 N
VHEMI09490 Torrubiella hemipterigena VHEMI09490 N
TDEL_0A03400 Torulaspora delbrueckii TDEL_0A03400 I
TRIREDRAFT_27357 Trichoderma reesei TRIREDRAFT_27357 N
TRIVIDRAFT_125026 Trichoderma virens TRIVIDRAFT_125026 N
TEQG_06289 Trichophyton equinum TEQG_06289 N
H101_00214 Trichophyton interdigitale H101_00214 N
H102_03074 Trichophyton rubrum H102_03074 N
H105_03092 Trichophyton soudanense H105_03092 N
TESG_06359 Trichophyton tonsurans TESG_06359 N
TRV_00290 Trichophyton verrucosum TRV_00290 N
GSTUM_00004466001 Tuber melanosporum GSTUM_00004466001 N
UREG_02611 Uncinocarpus reesii UREG_02611 N
UV8b_4500 Ustilaginoidea virens UV8b_4500 N
UHOR_03142 Ustilago hordei UHOR_03142 N
UM05182 Ustilago maydis UM05182 N
PV09_01119 Verruconis gallopava PV09_01119 N
VDBG_05547 Verticillium albo atrum VDBG_05547 N
VDBG_05547 Verticillium alfalfae VDBG_05547 N
VDAG_07492 Verticillium dahliae VDAG_07492 N
BN7_3380 Wickerhamomyces ciferrii BN7_3380 I
BN7_4359 Wickerhamomyces ciferrii BN7_4359 N
YALI0_D04785g Yarrowia lipolytica YALI0_D04785g I
ZBAI_09477 Zygosaccharomyces bailii ZBAI_09477 I
ZYRO0D11286g Zygosaccharomyces rouxii ZYRO0D11286g I
Mycgr3G38379 Zymoseptoria tritici Mycgr3G38379 N