CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_001181
(
Theobroma cacao
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
TCM_001181
T256425_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX92190
MADS box
9
56
RIEDVTRCQVTFSKRRSSLLRKANEISVFCDVDVALVAFSPSGRVSKF
EOX92191
MADS box
9
56
RIEDVTRCQVTFSKRRSSLLRKANEISVFCDVDVALVAFSPSGRVSKF
Links
Other
MADS box
family TFs
Other
Theobroma cacao
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10001730m.g
Citrus clementina
Ciclev10001730m.g
I
0.708
orange1.1g046530m.g
Citrus sinensis
orange1.1g046530m.g
I
0.708
mgf017283m
Mimulus guttatus
mgf017283m
N
0.771
mgf021248m
Mimulus guttatus
mgf021248m
N
0.833
PRUPE_ppa020874mg
Prunus persica
PRUPE_ppa020874mg
I
0.708
PGSC0003DMG400036414
Solanum tuberosum
PGSC0003DMG400036414
N
0.708
PGSC0003DMG400044568
Solanum tuberosum
PGSC0003DMG400044568
N
0.708
VIT_19s0014g00310
Vitis vinifera
VIT_19s0014g00310
N
0.708