TRIVIDRAFT_144166 (Trichoderma virens)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TRIVIDRAFT_144166 T256709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.708 0.708
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHK25422 MADS box 10 57

Links

Other MADS box family TFs
Other Trichoderma virens TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_01626 Beauveria bassiana BBA_01626 N 0.000
CPUR_01633 Claviceps purpurea CPUR_01633 N 0.000
CGGC5_8876 Colletotrichum gloeosporioides CGGC5_8876 N 0.000
GLRG_00605 Colletotrichum graminicola GLRG_00605 N 0.000
CH063_10454 Colletotrichum higginsianum CH063_10454 N 0.000
Cob_13289 Colletotrichum orbiculare Cob_13289 N 0.000
CSUB01_06780 Colletotrichum sublineola CSUB01_06780 N 0.000
CCM_00106 Cordyceps militaris CCM_00106 N 0.000
UCREL1_2115 Eutypa lata UCREL1_2115 N 0.000
FFUJ_00487 Fusarium fujikuroi FFUJ_00487 N 0.000
FGRRES_00750 Fusarium graminearum FGRRES_00750 N 0.000
FOXG_01081 Fusarium oxysporum FOXG_01081 N 0.000
FPSE_01269 Fusarium pseudograminearum FPSE_01269 N 0.000
NechaG75378 Fusarium solani NechaG75378 N 0.000
FVEG_00433 Fusarium verticillioides FVEG_00433 N 0.000
GGTG_07801 Gaeumannomyces graminis GGTG_07801 N 0.000
MAC_05157 Metarhizium acridum MAC_05157 N 0.000
MAM_06097 Metarhizium album MAM_06097 N 0.000
MANI_025150 Metarhizium anisopliae MANI_025150 N 0.000
MBR_00240 Metarhizium brunneum MBR_00240 N 0.000
MGU_08133 Metarhizium guizhouense MGU_08133 N 0.000
MAJ_06003 Metarhizium majus MAJ_06003 N 0.000
X797_002594 Metarhizium robertsii X797_002594 N 0.000
fgenesh1_pg.sca_1_chr1_3_0000989 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000989 N 0.000
OCS_04926 Ophiocordyceps sinensis OCS_04926 N 0.000
F503_04232 Ophiostoma piceae uamh F503_04232 N 0.000
PFICI_06254 Pestalotiopsis fici PFICI_06254 N 0.000
SAPIO_CDS5481 Scedosporium apiospermum SAPIO_CDS5481 N 0.000
SPBR_07989 Sporothrix brasiliensis SPBR_07989 N 0.000
HMPREF1624_07505 Sporothrix schenckii HMPREF1624_07505 N 0.000
UCRPA7_6169 Togninia minima UCRPA7_6169 N 0.000
VHEMI05051 Torrubiella hemipterigena VHEMI05051 N 0.000
TRIATDRAFT_9815 Trichoderma atroviride TRIATDRAFT_9815 N 0.000
TRIREDRAFT_43269 Trichoderma reesei TRIREDRAFT_43269 N 0.000
TRIVIDRAFT_19860 Trichoderma virens TRIVIDRAFT_19860 N 0.000
VDBG_07369 Verticillium albo atrum VDBG_07369 N 0.000
VDBG_07369 Verticillium alfalfae VDBG_07369 N 0.000