UREG_04511 (Uncinocarpus reesii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 UREG_04511 T256734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.868 0.868
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.816 0.816
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.816 0.816
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.816 0.816
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.816 0.816
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.816 0.816
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.816 0.816
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.737 0.737
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.737 0.737
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.737 0.737
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.737 0.737
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.737 0.737
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.737 0.737
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.737 0.737
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.737 0.737
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.737 0.737
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.737 0.737
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.737 0.737
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.737 0.737
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.737 0.737
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.737 0.737
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.737 0.737
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.737 0.737
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.737 0.737
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.737 0.737
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.737 0.737
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.737 0.737
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.737 0.737
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEP79665 MADS box 61 98

Links

Other MADS box family TFs
Other Uncinocarpus reesii TFs

369 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCSADRAFT_109777 Bipolaris sorokiniana COCSADRAFT_109777 N
COCCADRAFT_35218 Bipolaris zeicola COCCADRAFT_35218 N
PVAR5_2222 Byssochlamys spectabilis PVAR5_2222 N
A1O1_00584 Capronia coronata A1O1_00584 N
PV04_01563 Capronia semiimmersa PV04_01563 N
CHGG_01491 Chaetomium globosum CHGG_01491 N
Z519_03005 Cladophialophora bantiana Z519_03005 N
G647_00537 Cladophialophora carrionii G647_00537 N
PV07_10166 Cladophialophora immunda PV07_10166 N
A1O5_03686 Cladophialophora psammophila A1O5_03686 N
A1O7_00496 Cladophialophora yegresii A1O7_00496 N
W97_06158 Coniosporium apollinis W97_06158 N
fgenesh1_pg.C_scaffold_4000277 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4000277 N
DOTSEDRAFT_74979 Dothistroma septosporum DOTSEDRAFT_74979 N
EPUS_07706 Endocarpon pusillum EPUS_07706 N
A1O9_04841 Exophiala aquamarina A1O9_04841 N
HMPREF1120_06189 Exophiala dermatitidis HMPREF1120_06189 N
PV10_07538 Exophiala mesophila PV10_07538 N
PV06_03594 Exophiala oligosperma PV06_03594 N
PV11_08024 Exophiala sideris PV11_08024 N
PV08_06011 Exophiala spinifera PV08_06011 N
PV05_11133 Exophiala xenobiotica PV05_11133 N
Z517_08280 Fonsecaea pedrosoi Z517_08280 N
GGTG_01539 Gaeumannomyces graminis GGTG_01539 N
LEMA_P096450.1 Leptosphaeria maculans LEMA_P096450.1 N
MGG_01624 Magnaporthe oryzae MGG_01624 N
MBM_04902 Marssonina brunnea MBM_04902 N
MYCTH_98955 Myceliophthora thermophila MYCTH_98955 N
gw1.6.17.1 Mycosphaerella fijiensis gw1.6.17.1 N
e_gw1.11.76.1 Mycosphaerella graminicola e_gw1.11.76.1 N
UCRNP2_236 Neofusicoccum parvum UCRNP2_236 N
NCU16491 Neurospora crassa NCU16491 N
aug-scaffold_4.g111 Neurospora discreta aug-scaffold_4.g111 N
NEUTE1DRAFT_134023 Neurospora tetrasperma NEUTE1DRAFT_134023 N
PODANS_1_7540 Podospora anserina PODANS_1_7540 N
MYCFIDRAFT_115419 Pseudocercospora fijiensis MYCFIDRAFT_115419 N
V499_01440 Pseudogymnoascus pannorum V499_01440 N
PTRG_06263 Pyrenophora triticirepentis PTRG_06263 N
Z518_04016 Rhinocladiella mackenziei Z518_04016 N
SAPIO_CDS3171 Scedosporium apiospermum SAPIO_CDS3171 N
SMAC_04819 Sordaria macrospora SMAC_04819 N
THITE_19726 Thielavia terrestris THITE_19726 N
UCRPA7_3950 Togninia minima UCRPA7_3950 N
PV09_05917 Verruconis gallopava PV09_05917 N
Mycgr3G49868 Zymoseptoria tritici Mycgr3G49868 N