Cucsa.224270 (Cucumis sativus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cucsa.224270 T257281_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.224270.1 MADS box 10 54

Links

Other MADS box family TFs
Other Cucumis sativus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_33641 Amanita muscaria M378DRAFT_33641 N
GLOTRDRAFT_135627 Gloeophyllum trabeum GLOTRDRAFT_135627 N
JAAARDRAFT_37988 Jaapia argillacea JAAARDRAFT_37988 N
PAXRUDRAFT_697793 Paxillus rubicundulus PAXRUDRAFT_697793 N
PILCRDRAFT_817486 Piloderma croceum PILCRDRAFT_817486 N
PISMIDRAFT_8901 Pisolithus microcarpus PISMIDRAFT_8901 N
M404DRAFT_1002423 Pisolithus tinctorius M404DRAFT_1002423 N
SCLCIDRAFT_1210457 Scleroderma citrinum SCLCIDRAFT_1210457 N
SERLA73DRAFT_161809 Serpula lacrymans SERLA73DRAFT_161809 N
CY34DRAFT_796967 Suillus luteus CY34DRAFT_796967 N