Carubv10007591m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10007591m.g T257750_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10007591m MADS box 7 53

Links

Other MADS box family TFs
Other Capsella rubella TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATEG_08156 Aspergillus terreus CADATEAG00005050 I
A1O1_00042 Capronia coronata A1O1_00042 I
A1O3_02176 Capronia epimyces A1O3_02176 I
PV04_01709 Capronia semiimmersa PV04_01709 I
Z519_03196 Cladophialophora bantiana Z519_03196 I
G647_00393 Cladophialophora carrionii G647_00393 I
PV07_10364 Cladophialophora immunda PV07_10364 I
A1O5_03878 Cladophialophora psammophila A1O5_03878 I
A1O7_00358 Cladophialophora yegresii A1O7_00358 I
HMPREF1541_02336 Cyphellophora europaea HMPREF1541_02336 I
A1O9_05772 Exophiala aquamarina A1O9_05772 N
HMPREF1120_05852 Exophiala dermatitidis HMPREF1120_05852 N
PV10_01908 Exophiala mesophila PV10_01908 N
PV06_03988 Exophiala oligosperma PV06_03988 N
PV11_08528 Exophiala sideris PV11_08528 N
PV08_06249 Exophiala spinifera PV08_06249 N
PV05_10994 Exophiala xenobiotica PV05_10994 N
Z517_08575 Fonsecaea pedrosoi Z517_08575 I
Z518_03696 Rhinocladiella mackenziei Z518_03696 I