CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10024749m.g
(
Capsella rubella
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Carubv10024749m.g
T257824_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10024749m
MADS box
10
57
KIECPKERSNKYSKRKKGILKKTEQLALLCNVDIVMVLISPTNKPTIF
Links
Other
MADS box
family TFs
Other
Capsella rubella
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26326s0009
Boechera stricta
Bostr.26326s0009
I
0.812
Carubv10025621m.g
Capsella rubella
Carubv10025621m.g
N
0.917