CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_24864.2
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_24864.2
T258031_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_24864.2
MADS box
2
42
TKKKKSYFQEKEEEFMKKVSELSMLCKVKACEIIYSPYDWQ
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB01725.1
Alternaria brassicicola
AB01725.1
N
M437DRAFT_45546
Aureobasidium melanogenum
M437DRAFT_45546
I
BAUCODRAFT_37166
Baudoinia compniacensis
BAUCODRAFT_37166
I
BBA_01486
Beauveria bassiana
BBA_01486
N
COCC4DRAFT_151267
Bipolaris maydis
COCC4DRAFT_151267
N
COCMIDRAFT_99367
Bipolaris oryzae
COCMIDRAFT_99367
N
COCSADRAFT_312964
Bipolaris sorokiniana
COCSADRAFT_312964
N
COCVIDRAFT_40098
Bipolaris victoriae
COCVIDRAFT_40098
N
COCCADRAFT_88870
Bipolaris zeicola
COCCADRAFT_88870
N
Bcin07g06260
Botrytis cinerea
Bcin07g06260
I
PV04_05906
Capronia semiimmersa
PV04_05906
N
CHGG_04697
Chaetomium globosum
CHGG_04697
I
Z519_07787
Cladophialophora bantiana
Z519_07787
N
G647_09706
Cladophialophora carrionii
G647_09706
N
PV07_04349
Cladophialophora immunda
PV07_04349
N
A1O5_07945
Cladophialophora psammophila
A1O5_07945
N
A1O7_05540
Cladophialophora yegresii
A1O7_05540
N
CCM_05346
Cordyceps militaris
CCM_05346
N
HMPREF1541_01199
Cyphellophora europaea
HMPREF1541_01199
N
DOTSEDRAFT_161080
Dothistroma septosporum
DOTSEDRAFT_161080
I
HMPREF1120_01168
Exophiala dermatitidis
HMPREF1120_01168
N
PV10_06983
Exophiala mesophila
PV10_06983
N
PV06_01163
Exophiala oligosperma
PV06_01163
N
PV05_04590
Exophiala xenobiotica
PV05_04590
N
Z517_04112
Fonsecaea pedrosoi
Z517_04112
N
GGTG_02836
Gaeumannomyces graminis
GGTG_02836
I
MPH_12582
Macrophomina phaseolina
MPH_12582
I
MGG_12339
Magnaporthe oryzae
MGG_12339
I
MAPG_00999
Magnaporthe poae
MAPG_00999
I
MBM_06665
Marssonina brunnea
MBM_06665
I
MYCTH_2298970
Myceliophthora thermophila
MYCTH_2298970
I
e_gw1.7.93.1
Mycosphaerella fijiensis
e_gw1.7.93.1
I
UCRNP2_10087
Neofusicoccum parvum
UCRNP2_10087
I
NCU07675
Neurospora crassa
NCU07675
D
estExt_Genewise1Plus.C_31316
Neurospora discreta
estExt_Genewise1Plus.C_31316
I
NEUTE1DRAFT_60106
Neurospora tetrasperma
NEUTE1DRAFT_60106
I
U727_00431202221
Penicillium solitum
U727_00431202221
N
PFICI_04665
Pestalotiopsis fici
PFICI_04665
I
MYCFIDRAFT_34745
Pseudocercospora fijiensis
MYCFIDRAFT_34745
I
GMDG_04003
Pseudogymnoascus destructans
GMDG_04003
N
SETTUDRAFT_155086
Setosphaeria turcica
SETTUDRAFT_155086
N
SMAC_00876
Sordaria macrospora
SMAC_00876
I
SEPMUDRAFT_148959
Sphaerulina musiva
SEPMUDRAFT_148959
I
SPBR_00126
Sporothrix brasiliensis
SPBR_00126
N
HMPREF1624_05867
Sporothrix schenckii
HMPREF1624_05867
N
TRIVIDRAFT_221632
Trichoderma virens
TRIVIDRAFT_221632
I
H102_02976
Trichophyton rubrum
H102_02976
I
H105_02995
Trichophyton soudanense
H105_02995
I
GSTUM_00000679001
Tuber melanosporum
GSTUM_00000679001
N
PV09_03219
Verruconis gallopava
PV09_03219
I
Mycgr3G41440
Zymoseptoria tritici
Mycgr3G41440
I