evm.TU.contig_26058.1 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_26058.1 T258040_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.756 0.756
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_26058.1 MADS box 10 55

Links

Other MADS box family TFs
Other Carica papaya TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000012761 Anas platyrhynchos ENSAPLG00000012761 I 0.000
ENSAMXG00000012547 Astyanax mexicanus ENSAMXG00000012547 I 0.000
ZBTB17 Bos taurus ENSBTAG00000018730 I 0.000
ZBTB17 Callithrix jacchus ENSCJAG00000008499 I 0.000
ZBTB17 Canis familiaris ENSCAFG00000016122 I 0.000
ZBTB17 Cavia porcellus ENSCPOG00000014042 I 0.000
zbtb17 Danio rerio ENSDARG00000074548 I 0.000
ZBTB17 Dasypus novemcinctus ENSDNOG00000001983 I 0.000
ZBTB17 Equus caballus ENSECAG00000024826 I 0.000
ENSFALG00000003542 Ficedula albicollis ENSFALG00000003542 I 0.000
ENSGMOG00000008387 Gadus morhua ENSGMOG00000008387 I 0.000
ENSGALG00000003669 Gallus gallus ENSGALG00000003669 I 0.000
zbtb17 Gasterosteus aculeatus ENSGACG00000005273 I 0.000
ZBTB17 Gorilla gorilla ENSGGOG00000012058 I 0.000
ZBTB17 Homo sapiens ENSG00000116809 D 0.000
ENSSTOG00000005696 Ictidomys tridecemlineatus ENSSTOG00000005696 I 0.000
ZBTB17 Loxodonta africana ENSLAFG00000004528 I 0.000
ENSP00000364885 Macaca fascicularis ENSP00000364885 I 0.000
ZBTB17 Macaca mulatta ENSMMUG00000008031 I 0.000
ENSMEUG00000000608 Macropus eugenii ENSMEUG00000000608 I 0.000
ZBTB17 Monodelphis domestica ENSMODG00000003391 I 0.000
Zbtb17 Mus musculus ENSMUSG00000006215 D 0.000
Myotis_brandtii_ZBTB17_10010507 Myotis brandtii Myotis_brandtii_ZBTB17_10010507 I 0.000
ZBTB17 Myotis lucifugus ENSMLUG00000025202 I 0.000
ENSNLEG00000007658 Nomascus leucogenys ENSNLEG00000007658 I 0.000
ZBTB17 Ochotona princeps ENSOPRG00000015846 I 0.000
Ogr02991 Ophisaurus gracilis Ogr02991 I 0.000
ENSONIG00000006553 Oreochromis niloticus ENSONIG00000006553 I 0.000
ZBTB17 Ornithorhynchus anatinus ENSOANG00000008832 I 0.000
ZBTB17 Oryctolagus cuniculus ENSOCUG00000026236 I 0.000
ZBTB17 Otolemur garnettii ENSOGAG00000005075 I 0.000
ENSPANG00000015972 Papio anubis ENSPANG00000015972 I 0.000
ENSPFOG00000015192 Poecilia formosa ENSPFOG00000015192 I 0.000
Pvit_06232 Pogona vitticeps Pvit_06232 I 0.000
ENSPPYG00000001833 Pongo abelii ENSPPYG00000001833 I 0.000
ZBTB17 Procavia capensis ENSPCAG00000009449 I 0.000
ZBTB17 Pteropus vampyrus ENSPVAG00000013802 I 0.000
Zbtb17 Rattus norvegicus ENSRNOG00000010436 I 0.000
ZBTB17 Sorex araneus ENSSARG00000006626 I 0.000
ZBTB17 Taeniopygia guttata ENSTGUG00000002039 I 0.000
zbtb17 Takifugu rubripes ENSTRUG00000003277 I 0.000
zbtb17 Tetraodon nigroviridis ENSTNIG00000010902 I 0.000
ZBTB17 Tursiops truncatus ENSTTRG00000015707 I 0.000
zbtb17.S Xenopus laevis XB-GENE-6254499 I 0.000
zbtb17 Xenopus tropicalis XB-GENE-940673 I 0.000