evm.TU.contig_35265 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_35265 T258085_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_35265.1 MADS box 10 31

Links

Other MADS box family TFs
Other Carica papaya TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AFUA_4G03670 Aspergillus fumigatus CADAFUAG00001341 N 0.000
ANIA_05775 Aspergillus nidulans CADANIAG00003279 N 0.000
A1O1_01367 Capronia coronata A1O1_01367 N 0.000
PV04_00511 Capronia semiimmersa PV04_00511 N 0.000
G647_01519 Cladophialophora carrionii G647_01519 N 0.000
A1O7_01450 Cladophialophora yegresii A1O7_01450 N 0.000
PV10_03009 Exophiala mesophila PV10_03009 N 0.000
PV06_06048 Exophiala oligosperma PV06_06048 N 0.000
PV11_10054 Exophiala sideris PV11_10054 N 0.000
PV08_12089 Exophiala spinifera PV08_12089 N 0.000
PV08_11848 Exophiala spinifera PV08_11848 N 0.000
PV05_10000 Exophiala xenobiotica PV05_10000 N 0.000
NFIA_029740 Neosartorya fischeri CADNFIAG00002822 N 0.000
PAAG_00881 Paracoccidioides sp lutzii PAAG_00881 N 0.000
Pc14g01370 Penicillium chrysogenum Pc14g01370 N 0.000
Pc21g06560 Penicillium chrysogenum Pc21g06560 N 0.000
PDE_02517 Penicillium oxalicum PDE_02517 N 0.000
PCH_Pc21g06560 Penicillium rubens PCH_Pc21g06560 N 0.000
PCH_Pc14g01370 Penicillium rubens PCH_Pc14g01370 N 0.000
Z518_02084 Rhinocladiella mackenziei Z518_02084 N 0.000
Z518_05059 Rhinocladiella mackenziei Z518_05059 N 0.000
PV09_07855 Verruconis gallopava PV09_07855 N 0.000