CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G157100
(
Gossypium raimondii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Gorai.009G157100
T258442_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G157100.1
MADS box
18
65
IIKIEHDRLISFSKRCTGIYKKISKLSTICGGEILFIIFLPAGKPYSF
Links
Other
MADS box
family TFs
Other
Gossypium raimondii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.00815.93.1
Aspergillus carbonarius
e_gw1.00815.93.1
N
0.000
PVAR5_1141
Byssochlamys spectabilis
PVAR5_1141
N
0.000
CHGG_08269
Chaetomium globosum
CHGG_08269
N
0.000
CGGC5_6888
Colletotrichum gloeosporioides
CGGC5_6888
N
0.000
fgenesh1_pg.C_scaffold_9000410
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_9000410
N
0.000
HMPREF1120_04133
Exophiala dermatitidis
HMPREF1120_04133
N
0.000
FPSE_08332
Fusarium pseudograminearum
FPSE_08332
N
0.000
MBM_08217
Marssonina brunnea
MBM_08217
N
0.000
MBR_08937
Metarhizium brunneum
MBR_08937
N
0.000
NFIA_059770
Neosartorya fischeri
CADNFIAG00005104
N
0.000
F503_02724
Ophiostoma piceae uamh
F503_02724
N
0.000
Z518_08215
Rhinocladiella mackenziei
Z518_08215
N
0.000
SS1G_02247
Sclerotinia sclerotiorum
SS1G_02247
N
0.000
HMPREF1624_08182
Sporothrix schenckii
HMPREF1624_08182
N
0.000
S40288_06829
Stachybotrys chartarum
S40288_06829
N
0.000