CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.013G155200
(
Gossypium raimondii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Gorai.013G155200
T258505_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G155200.1
MADS box
10
57
YITNDSTRKVTYKKRMKALKNKMSKLSTRCGSDTCVIMYSPYKSQLEV
Links
Other
MADS box
family TFs
Other
Gossypium raimondii
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_033680
Acremonium chrysogenum
ACRE_033680
I
0.000
ARB_00440
Arthroderma benhamiae
ARB_00440
I
0.000
ANIA_01298
Aspergillus nidulans
CADANIAG00001319
D
0.000
M437DRAFT_84437
Aureobasidium melanogenum
M437DRAFT_84437
N
0.000
M438DRAFT_372080
Aureobasidium pullulans
M438DRAFT_372080
N
0.000
AUEXF2481DRAFT_24869
Aureobasidium subglaciale
AUEXF2481DRAFT_24869
N
0.000
BBA_08083
Beauveria bassiana
BBA_08083
I
0.000
BDDG_06829
Blastomyces dermatitidis
BDDG_06829
I
0.000
PVAR5_5311
Byssochlamys spectabilis
PVAR5_5311
I
0.000
A1O1_06603
Capronia coronata
A1O1_06603
I
0.000
A1O3_05723
Capronia epimyces
A1O3_05723
I
0.000
PV04_06676
Capronia semiimmersa
PV04_06676
I
0.000
G647_06262
Cladophialophora carrionii
G647_06262
I
0.000
PV07_03563
Cladophialophora immunda
PV07_03563
I
0.000
A1O7_06270
Cladophialophora yegresii
A1O7_06270
I
0.000
CPUR_03208
Claviceps purpurea
CPUR_03208
I
0.000
CIMG_10254
Coccidioides immitis
CIMG_10254
I
0.000
CPC735_013440
Coccidioides posadasii
CPC735_013440
I
0.000
CFIO01_07294
Colletotrichum fioriniae
CFIO01_07294
N
0.000
CGGC5_8357
Colletotrichum gloeosporioides
CGGC5_8357
I
0.000
GLRG_03872
Colletotrichum graminicola
GLRG_03872
N
0.000
CH063_06329
Colletotrichum higginsianum
CH063_06329
I
0.000
Cob_01730
Colletotrichum orbiculare
Cob_01730
N
0.000
CSUB01_10562
Colletotrichum sublineola
CSUB01_10562
N
0.000
CCM_01116
Cordyceps militaris
CCM_01116
I
0.000
HMPREF1541_08750
Cyphellophora europaea
HMPREF1541_08750
N
0.000
HMPREF1120_04164
Exophiala dermatitidis
HMPREF1120_04164
I
0.000
PV06_10058
Exophiala oligosperma
PV06_10058
I
0.000
PV11_07531
Exophiala sideris
PV11_07531
I
0.000
PV08_08114
Exophiala spinifera
PV08_08114
I
0.000
PV05_08012
Exophiala xenobiotica
PV05_08012
I
0.000
Z517_01133
Fonsecaea pedrosoi
Z517_01133
I
0.000
FFUJ_01501
Fusarium fujikuroi
FFUJ_01501
I
0.000
FGRRES_01307
Fusarium graminearum
FGRRES_01307
I
0.000
FOXG_00080
Fusarium oxysporum
FOXG_00080
I
0.000
FPSE_01403
Fusarium pseudograminearum
FPSE_01403
I
0.000
FVEG_01436
Fusarium verticillioides
FVEG_01436
I
0.000
GGTG_01326
Gaeumannomyces graminis
GGTG_01326
N
0.000
LEMA_P050050.1
Leptosphaeria maculans
LEMA_P050050.1
I
0.000
MGG_05709
Magnaporthe oryzae
MGG_05709
I
0.000
MAPG_06566
Magnaporthe poae
MAPG_06566
N
0.000
MCYG_06262
Microsporum canis
MCYG_06262
I
0.000
MGYG_06696
Microsporum gypseum
MGYG_06696
I
0.000
MYCTH_2088766
Myceliophthora thermophila
MYCTH_2088766
N
0.000
PABG_03267
Paracoccidioides brasiliensis
PABG_03267
I
0.000
PAAG_02798
Paracoccidioides sp lutzii
PAAG_02798
I
0.000
Pc16g06560
Penicillium chrysogenum
Pc16g06560
I
0.000
PDIP_40460
Penicillium digitatum
PDIP_40460
I
0.000
PEX1_052970
Penicillium expansum
PEX1_052970
I
0.000
PITC_023420
Penicillium italicum
PITC_023420
I
0.000
PDE_07053
Penicillium oxalicum
PDE_07053
I
0.000
PCH_Pc16g06560
Penicillium rubens
PCH_Pc16g06560
I
0.000
U727_0043047031
Penicillium solitum
U727_0043047031
I
0.000
SNOG_15057
Phaeosphaeria nodorum
SNOG_15057
I
0.000
GMDG_01119
Pseudogymnoascus destructans
GMDG_01119
I
0.000
V499_08351
Pseudogymnoascus pannorum
V499_08351
I
0.000
Z518_05851
Rhinocladiella mackenziei
Z518_05851
I
0.000
SNOG_15057
Stagonospora nodorum
SNOG_15057
I
0.000
UCRPA7_7634
Togninia minima
UCRPA7_7634
N
0.000
VHEMI02386
Torrubiella hemipterigena
VHEMI02386
I
0.000
TRIATDRAFT_148632
Trichoderma atroviride
TRIATDRAFT_148632
I
0.000
TRIREDRAFT_58130
Trichoderma reesei
TRIREDRAFT_58130
I
0.000
TRIVIDRAFT_173998
Trichoderma virens
TRIVIDRAFT_173998
I
0.000
H102_01702
Trichophyton rubrum
H102_01702
I
0.000
H105_01718
Trichophyton soudanense
H105_01718
I
0.000
TRV_02680
Trichophyton verrucosum
TRV_02680
I
0.000
UREG_03477
Uncinocarpus reesii
UREG_03477
I
0.000
VDBG_05122
Verticillium albo atrum
VDBG_05122
N
0.000
VDBG_05122
Verticillium alfalfae
VDBG_05122
N
0.000
VDAG_08823
Verticillium dahliae
VDAG_08823
N
0.000