CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g048296m.g
(
Citrus sinensis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
orange1.1g048296m.g
T258842_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g048296m
MADS box
18
65
RIENNSSRKVAFSKRRKGMFKKASELCRLCDTEIAIIVFSPKGRLYSF
Links
Other
MADS box
family TFs
Other
Citrus sinensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo1g040180
Brassica oleracea
Bo1g040180
I
0.708
Bra013891
Brassica rapa
Bra013891
I
0.708
Ciclev10018138m.g
Citrus clementina
Ciclev10018138m.g
N
0.979
MDP0000144597
Malus domestica
MDP0000144597
I
0.708
mgf001038m
Mimulus guttatus
mgf001038m
I
0.729
OPUNC08G19670
Oryza punctata
OPUNC08G19670
I
0.708