Thhalv10024162m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10024162m.g T259187_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10024162m MADS box 7 54

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PVAR5_1869 Byssochlamys spectabilis PVAR5_1869 N 0.000
PGUG_05832 Candida guilliermondii PGUG_05832 I 0.000
PV10_03721 Exophiala mesophila PV10_03721 N 0.000
Z517_09549 Fonsecaea pedrosoi Z517_09549 N 0.000
FFUJ_12947 Fusarium fujikuroi FFUJ_12947 N 0.000
PGUG_05832 Meyerozyma guilliermondii PGUG_05832 I 0.000
GNLVRS01_PISO0J19831g Millerozyma farinosa GNLVRS01_PISO0J19831g N 0.000
GNLVRS01_PISO0I18070g Millerozyma farinosa GNLVRS01_PISO0I18070g N 0.000
JL09_g3982 Pichia kudriavzevii JL09_g3982 N 0.000
PAN0_005c2519 Pseudozyma antarctica PAN0_005c2519 N 0.000
PSEUBRA_SCAF5g02278 Pseudozyma brasiliensis PSEUBRA_SCAF5g02278 N 0.000
PHSY_000986 Pseudozyma hubeiensis PHSY_000986 N 0.000
Z518_00888 Rhinocladiella mackenziei Z518_00888 N 0.000
V565_080510 Rhizoctonia solani V565_080510 N 0.000
SAPIO_CDS4479 Scedosporium apiospermum SAPIO_CDS4479 I 0.000
HMPREF1624_01132 Sporothrix schenckii HMPREF1624_01132 I 0.000
S40285_05647 Stachybotrys chlorohalonata S40285_05647 N 0.000
VHEMI07618 Torrubiella hemipterigena VHEMI07618 N 0.000
UM02765 Ustilago maydis UM02765 N 0.000
ZBAI_02843 Zygosaccharomyces bailii ZBAI_02843 I 0.000
ZBAI_09101 Zygosaccharomyces bailii ZBAI_09101 I 0.000
ZYRO0G12584g Zygosaccharomyces rouxii ZYRO0G12584g N 0.000