CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MECP2
(
Monodelphis domestica
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSMODG00000011643
T260264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mecp2
M00806_2.00
Mus musculus
NNNNNHAHNN
NNDTDNNNNN
PBM
Weirauch et al.(2013)
pTH3054
1.000
1.000
MECP2
M09257_2.00
Homo sapiens
SCCGGRR
YYCCGGS
Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C
1.000
1.000
Mecp2
M09259_2.00
Mus musculus
SCCGGRR
YYCCGGS
Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C
1.000
1.000
MECP2
M11032_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_01
1.000
1.000
MECP2
M11033_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_02
1.000
1.000
MECP2
M11034_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_Q4_01
1.000
1.000
MECP2
M11035_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MECP2_Q4
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000014585
MBD
99
170
RGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFDFTVTGR
ENSMODP00000014588
MBD
109
180
RGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFDFTVTGR
Links
Other
MBD
family TFs
Other
Monodelphis domestica
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_190401
Agaricus bisporus
AGABI2DRAFT_190401
N
M378DRAFT_157099
Amanita muscaria
M378DRAFT_157099
N
BOTBODRAFT_169843
Botryobasidium botryosum
BOTBODRAFT_169843
N
CERSUDRAFT_122924
Ceriporiopsis subvermispora
CERSUDRAFT_122924
I
L804_02990
Cryptococcus gattii
L804_02990
N
CNE01220
Cryptococcus neoformans
CNE01220
N
FIBRA_01283
Fibroporia radiculosa
FIBRA_01283
I
FOMPIDRAFT_1125211
Fomitopsis pinicola
FOMPIDRAFT_1125211
I
GALMADRAFT_239880
Galerina marginata
GALMADRAFT_239880
N
GLOTRDRAFT_71884
Gloeophyllum trabeum
GLOTRDRAFT_71884
N
GYMLUDRAFT_42303
Gymnopus luxurians
GYMLUDRAFT_42303
N
M413DRAFT_105950
Hebeloma cylindrosporum
M413DRAFT_105950
N
HETIRDRAFT_239856
Heterobasidion irregulare
HETIRDRAFT_239856
I
JAAARDRAFT_32137
Jaapia argillacea
JAAARDRAFT_32137
N
K443DRAFT_672745
Laccaria amethystina
K443DRAFT_672745
N
LACBIDRAFT_306097
Laccaria bicolor
LACBIDRAFT_306097
N
Moror_8326
Moniliophthora roreri
Moror_8326
N
PABG_03064
Paracoccidioides brasiliensis
PABG_03064
I
PAXRUDRAFT_34811
Paxillus rubicundulus
PAXRUDRAFT_34811
N
PHACADRAFT_208823
Phanerochaete carnosa
PHACADRAFT_208823
N
PHLGIDRAFT_62123
Phlebiopsis gigantea
PHLGIDRAFT_62123
N
estExt_fgeneshPB_pg.C_100077
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_100077
I
PILCRDRAFT_823114
Piloderma croceum
PILCRDRAFT_823114
N
PIIN_05400
Piriformospora indica
PIIN_05400
I
M404DRAFT_122029
Pisolithus tinctorius
M404DRAFT_122029
N
GMDG_02536
Pseudogymnoascus destructans
GMDG_02536
I
V499_02495
Pseudogymnoascus pannorum
V499_02495
I
SCHCODRAFT_13988
Schizophyllum commune
SCHCODRAFT_13988
N
SCLCIDRAFT_1221475
Scleroderma citrinum
SCLCIDRAFT_1221475
N
SERLA73DRAFT_186737
Serpula lacrymans
SERLA73DRAFT_186737
N
M407DRAFT_16768
Tulasnella calospora
M407DRAFT_16768
N
YALI0_F05346g
Yarrowia lipolytica
YALI0_F05346g
N