CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Setdb2
(
Rattus norvegicus
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSRNOG00000021680
T260409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000036240
MBD
148
220
KGENPLQLPLRCHFQRRHAKTNSPSAALHVNYRTPCGRSLRNMEEVFHYLLETECNFLFTDNFSFNTYVQLTR
ENSRNOP00000065027
MBD
126
198
KGENPLQLPLRCHFQRRHAKTNSPSAALHVNYRTPCGRSLRNMEEVFHYLLETECNFLFTDNFSFNTYVQLTR
ENSRNOP00000066366
MBD
165
237
KGENPLQLPLRCHFQRRHAKTNSPSAALHVNYRTPCGRSLRNMEEVFHYLLETECNFLFTDNFSFNTYVQLTR
Links
Other
MBD
family TFs
Other
Rattus norvegicus
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_14172
Aegilops tauschii
F775_14172
I
AMTR_s00145p00098450
Amborella trichopoda
AMTR_s00145p00098450
I
evm.TU.supercontig_92.99
Carica papaya
evm.TU.supercontig_92.99
I
GLYMA10G06680
Glycine max
GLYMA10G06680
N
MTR_1g062940
Medicago truncatula
MTR_1g062940
N
GSMUA_Achr10G13520_001
Musa acuminata
GSMUA_Achr10G13520_001
I
GSMUA_Achr10G14030_001
Musa acuminata
GSMUA_Achr10G14030_001
I
GSMUA_Achr5G06530_001
Musa acuminata
GSMUA_Achr5G06530_001
I
GSMUA_Achr5G28350_001
Musa acuminata
GSMUA_Achr5G28350_001
I
GSMUA_Achr6G14840_001
Musa acuminata
GSMUA_Achr6G14840_001
I
GSMUA_Achr6G15370_001
Musa acuminata
GSMUA_Achr6G15370_001
I
GSMUA_Achr7G18200_001
Musa acuminata
GSMUA_Achr7G18200_001
I
OB01G54920
Oryza brachyantha
OB01G54920
I
Solyc09g008390.1
Solanum lycopersicum
Solyc09g008390.1
I
Traes_1BS_B44ECE28C
Triticum aestivum
Traes_1BS_B44ECE28C
I
Traes_1DS_47E2D90AC1
Triticum aestivum
Traes_1DS_47E2D90AC1
I
Traes_1DS_47E2D90AC
Triticum aestivum
Traes_1DS_47E2D90AC
I