CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_005728
(
Oryza longistaminata
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
OLONG_005728
T260764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_005728-R1
MBD
4
45
YNFYVYPPNRVRLFSKDDVLLYIKEMKISGFDIDGQCNTSTQ
OLONG_005728-R1
MBD
55
165
NPEGLPQGWVKEVVFRKTHTGRIRRDRHYTDPIKNYVFRTKKSAALYVKTGKVTIRAFVQKTSVHEVYSFEKFTHLHESLQKRLNLGRTNQLRTRSSKVQKLSLKEGILSD
Links
Other
MBD
family TFs
Other
Oryza longistaminata
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_00936
Aegilops tauschii
F775_00936
N
BRADI2G48580
Brachypodium distachyon
BRADI2G48580
N
OBART01G29350
Oryza barthii
OBART01G29350
N
OB01G38300
Oryza brachyantha
OB01G38300
N
ORGLA01G0241400
Oryza glaberrima
ORGLA01G0241400
N
OGLUM01G33400
Oryza glumaepatula
OGLUM01G33400
N
BGIOSGA004373
Oryza indica
BGIOSGA004373
N
OLONG_024970
Oryza longistaminata
OLONG_024970
N
ONIVA01G33580
Oryza nivara
ONIVA01G33580
N
OPUNC01G29180
Oryza punctata
OPUNC01G29180
N
ORUFI01G32440
Oryza rufipogon
ORUFI01G32440
N
OS01G0723500
Oryza sativa
OS01G0723500
N
Pavir.Ea02697
Panicum virgatum
Pavir.Ea02697
N
Pavir.Eb02930
Panicum virgatum
Pavir.Eb02930
N
Sb03g033260
Sorghum bicolor
Sb03g033260
N
TRAES3BF016200040CFD_g
Triticum aestivum
TRAES3BF016200040CFD_g
N
TRIUR3_24313
Triticum urartu
TRIUR3_24313
N