CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10008176.g
(
Linum usitatissimum
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Lus10008176.g
T261535_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10008176
MBD
97
170
WVIDKPGVPRTPRGFRRYLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFVQANPQYKDVKLDDFNFTSPKVMED
Links
Other
MBD
family TFs
Other
Linum usitatissimum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_90390
Phytophthora capsici
estExt_fgenesh1_kg.C_90390
N
PITG_17552
Phytophthora infestans
PITG_17552
N
PITG_17554
Phytophthora infestans
PITG_17554
N
fgenesh_scip_prom.46568.6853
Phytophthora kernoviae
fgenesh_scip_prom.46568.6853
N
fgenesh_scip_prom.28083.2092
Phytophthora lateralis
fgenesh_scip_prom.28083.2092
N
F443_16830
Phytophthora parasitica
F443_16830
N
Phyra84537
Phytophthora ramorum
Phyra84537
N
Physo142765
Phytophthora sojae
Physo142765
N
maker-par_contig_4858-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_4858-fgenesh-gene-0.0
N