CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fa00610
(
Panicum virgatum
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Pavir.Fa00610
T261592_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fa00610.1.p
MBD
197
254
GDHLPREWSLQLGLKRKGGAVWVHCFSYVSPKGNQFSTCKEVSAYLMSLLGYPEVKSV
Links
Other
MBD
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G38747
Brachypodium distachyon
BRADI3G38747
N
0.741
Pavir.Fb01815
Panicum virgatum
Pavir.Fb01815
N
0.810
Si015222m.g
Setaria italica
Si015222m.g
N
0.793