mecp2 (Xenopus tropicalis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 XB-GENE-494740 T261680_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecp2
M00806_2.00 		Mus musculus
NNNNNHAHNN
NNDTDNNNNN		 PBM
Weirauch et al.(2013)
pTH3054 		0.943 0.943
MECP2
M09257_2.00 		Homo sapiens
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C 		0.943 0.943
Mecp2
M09259_2.00 		Mus musculus
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C 		0.943 0.943
MECP2
M11032_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_01 		0.943 0.943
MECP2
M11033_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_02 		0.943 0.943
MECP2
M11034_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4_01 		0.943 0.943
MECP2
M11035_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4 		0.943 0.943
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI68054 MBD 94 163

Links

Other MBD family TFs
Other Xenopus tropicalis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_78344 Bipolaris maydis COCC4DRAFT_78344 N 0.000
COCMIDRAFT_373 Bipolaris oryzae COCMIDRAFT_373 N 0.000
COCSADRAFT_261653 Bipolaris sorokiniana COCSADRAFT_261653 N 0.000
COCVIDRAFT_84024 Bipolaris victoriae COCVIDRAFT_84024 N 0.000
COCCADRAFT_36920 Bipolaris zeicola COCCADRAFT_36920 N 0.000
CSUB01_05147 Colletotrichum sublineola CSUB01_05147 N 0.000
FPSE_05040 Fusarium pseudograminearum FPSE_05040 N 0.000
LEMA_P080710.1 Leptosphaeria maculans LEMA_P080710.1 N 0.000
PTT_19583 Pyrenophora teres PTT_19583 N 0.000
SETTUDRAFT_102623 Setosphaeria turcica SETTUDRAFT_102623 N 0.000
GSTUM_00005291001 Tuber melanosporum GSTUM_00005291001 N 0.000
PV09_05386 Verruconis gallopava PV09_05386 N 0.000