fgenesh2_kg.6__2388__AT5G23930.1 (Arabidopsis lyrata)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02536 (mTERF) IPR003690 fgenesh2_kg.6__2388__AT5G23930.1 T262700_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G23930
M06996_2.00 		Arabidopsis thaliana
HNYHDCMDYYDYMGCCGCCR
YGGCGGCKRHRRHKGHDRND		 Dap-seq
OMalley et al.(2016)
AT5G23930_col_a 		0.898 0.898
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__2388__AT5G23930.1 mTERF 93 428

Links

Other mTERF family TFs
Other Arabidopsis lyrata TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018899 Ailuropoda melanoleuca ENSAMEG00000018899 N
ENSP00000321370-D1 Bos grunniens ENSP00000321370-D1 N
ZBED2 Bos taurus ENSBTAG00000046637 N
ZBED3 Callithrix jacchus ENSCJAG00000019950 N
ZBED2 Callithrix jacchus ENSCJAG00000020209 N
Cmyd_10015684 Chelonia mydas Cmyd_10015684 N
ENSCSAG00000018719 Chlorocebus sabaeus ENSCSAG00000018719 N
ENSCSAG00000019417 Chlorocebus sabaeus ENSCSAG00000019417 N
ZBED2 Choloepus hoffmanni ENSCHOG00000009685 N
ENSCHOG00000003372 Choloepus hoffmanni ENSCHOG00000003372 N
ZBED2 Dasypus novemcinctus ENSDNOG00000013027 N
ZBED3 Dasypus novemcinctus ENSDNOG00000041041 N
ZBED2 Equus caballus ENSECAG00000001371 N
ZBED2 Gorilla gorilla ENSGGOG00000010755 N
ZBED2 Homo sapiens ENSG00000177494 N
ENSP00000321370 Macaca fascicularis ENSP00000321370 N
ZBED3 Macaca mulatta ENSMMUG00000021357 N
ENSMMUG00000032061 Macaca mulatta ENSMMUG00000032061 N
ENSMEUG00000007529 Macropus eugenii ENSMEUG00000007529 N
ZBED2 Monodelphis domestica ENSMODG00000025309 N
ENSMPUG00000018931 Mustela putorius furo ENSMPUG00000018931 N
Myotis_brandtii_ZBED2_10003001 Myotis brandtii Myotis_brandtii_ZBED2_10003001 N
ZBED2 Myotis lucifugus ENSMLUG00000024352 N
ENSNLEG00000004079 Nomascus leucogenys ENSNLEG00000004079 N
ENSOANG00000015761 Ornithorhynchus anatinus ENSOANG00000015761 N
ZBED2 Oryctolagus cuniculus ENSOCUG00000029023 N
ZBED2 Otolemur garnettii ENSOGAG00000034292 N
ENSOARG00000001810 Ovis aries ENSOARG00000001810 N
ZBED2 Pan troglodytes ENSPTRG00000015206 N
ENSPANG00000001756 Papio anubis ENSPANG00000001756 N
ENSPANG00000009749 Papio anubis ENSPANG00000009749 N
ENSPPYG00000013560 Pongo abelii ENSPPYG00000013560 N
ZBED2 Pteropus vampyrus ENSPVAG00000002199 N
ZBED2 Sorex araneus ENSSARG00000010422 N
ZBED2 Sus scrofa ENSSSCG00000011936 N
ZBED3 Sus scrofa ENSSSCG00000014095 N
ENSTSYG00000000791 Tarsius syrichta ENSTSYG00000000791 N
ZBED2 Vicugna pacos ENSVPAG00000000425 N