CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0011s02560
(
Populus trichocarpa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
POPTR_0011s02560
T263434_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0011s02560.1
mTERF
34
185
IQLSVKSKSLLHKHPLYTPAHTNISFEIKEKILCLEIMGVDSGKALSQNPSLHTASLDSIQSIIFFLQSKGIHQKDLPRIFGMCPKVLTSNIRTDLKPVFNFLSQDLKVPDNNFRKAINKCPRLLVSSVRDQLKPCLFYLQRLGFEDLEALA
POPTR_0011s02560.1
mTERF
179
297
EDLEALAYQDPVLLVSNVQNTLIPKLKYLESIGFSRDEAVAMVLRCPALFTFSVENNFKPKFDYFAEEMKGKLTELKGFPQYFAFSLDKRIKPRHVEVVQSGVKIPLRLMLKSTDEEFG
Links
Other
mTERF
family TFs
Other
Populus trichocarpa
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_06532
Fusarium fujikuroi
FFUJ_06532
N
FGRRES_08138
Fusarium graminearum
FGRRES_08138
N
FOXG_02824
Fusarium oxysporum
FOXG_02824
N
FPSE_05461
Fusarium pseudograminearum
FPSE_05461
N
NechaG99472
Fusarium solani
NechaG99472
N
FVEG_01655
Fusarium verticillioides
FVEG_01655
N
MAC_01549
Metarhizium acridum
MAC_01549
N
MANI_000159
Metarhizium anisopliae
MANI_000159
N
MBR_02714
Metarhizium brunneum
MBR_02714
N
MGU_00300
Metarhizium guizhouense
MGU_00300
N
MAJ_02483
Metarhizium majus
MAJ_02483
N
MAJ_11289
Metarhizium majus
MAJ_11289
N
X797_000761
Metarhizium robertsii
X797_000761
N
estExt_fgenesh1_pg.C_sca_44_chr3_2_00042
Nectria haematococca
estExt_fgenesh1_pg.C_sca_44_chr3_2_00042
N