CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh4_pg.C_scaffold_40000133
(
Volvox carteri
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
fgenesh4_pg.C_scaffold_40000133
T264467_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh4_pg.C_scaffold_40000133
mTERF
94
317
LSQSTVMLAAVLNPGLSSLDATSQDVWFLAAKKHQLLAEPATLSRWLDFLLVYGMQLSDVQNFLLRSTPDLLYGTTLYQAGAVISFLKSLGLKNYLLASRVLCVWPELLGRDVEGQLRPVVTFLMSLGLEVAAVGRVVVMWPEVLLRSVEGQLAPWVTYLRELGCSTTQVGDVIGLCPHLLGFKPEEVFGDVLRALGDLAGICREDVRQMLSSSVAFLIAPSPS
fgenesh4_pg.C_scaffold_40000133
mTERF
250
423
VTYLRELGCSTTQVGDVIGLCPHLLGFKPEEVFGDVLRALGDLAGICREDVRQMLSSSVAFLIAPSPSDGVRAALECLLRHGFDKEQVREMVLARPELLAAKPHDLERSLKFVYHTVGGNNSTVLSCPLLLTKPLGQMLGPRYSFIQKQGLAHKYAGADGSTFEFYKLLVAEDA
Links
Other
mTERF
family TFs
Other
Volvox carteri
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001224701
Anisakis simplex
ASIM_0001224701
I
csin102876
Clonorchis sinensis
csin102876
I
DILT_0000534401
Diphyllobothrium latum
DILT_0000534401
I
ECANG7_06581
Echinococcus canadensis
ECANG7_06581
I
EmuJ_000915650
Echinococcus multilocularis
EmuJ_000915650
I
ECPE_0001225801
Echinostoma caproni
ECPE_0001225801
I
D915_05896
Fasciola hepatica
D915_05896
I
HMEL025049
Heliconius melpomene
HMEL025049
I
HelroG138724
Helobdella robusta
HelroG138724
I
HelroG74087
Helobdella robusta
HelroG74087
I
TTAC_0000915701
Hydatigera taeniaeformis
TTAC_0000915701
I
ENSLACG00000015207
Latimeria chalumnae
ENSLACG00000015207
I
MCINX005605
Melitaea cinxia
MCINX005605
I
Q0N4H2_NEMVE
Nematostella vectensis
Q0N4H2_NEMVE
D
NEMVEDRAFT_v1g114232
Nematostella vectensis
NEMVEDRAFT_v1g114232
I
NEMVEDRAFT_v1g17677
Nematostella vectensis
NEMVEDRAFT_v1g17677
I
NEMVEDRAFT_v1g47235
Nematostella vectensis
NEMVEDRAFT_v1g47235
I
NEMVEDRAFT_v1g47299
Nematostella vectensis
NEMVEDRAFT_v1g47299
I
NEMVEDRAFT_v1g69052
Nematostella vectensis
NEMVEDRAFT_v1g69052
I
Q0N4H7_NEMVE
Nematostella vectensis
Q0N4H7_NEMVE
D
T265_09780
Opisthorchis viverrini
T265_09780
I
ENSONIG00000018347
Oreochromis niloticus
ENSONIG00000018347
I
PXEA_0002165701
Protopolystoma xenopodis
PXEA_0002165701
I
SSLN_0001304301
Schistocephalus solidus
SSLN_0001304301
I
SCUD_0001655801
Schistosoma curassoni
SCUD_0001655801
I
A_02406
Schistosoma haematobium
A_02406
I
Sjc_0105010
Schistosoma japonicum
Sjc_0105010
I
SMRZ_0000721601
Schistosoma margrebowiei
SMRZ_0000721601
I
SMTD_0002243101
Schistosoma mattheei
SMTD_0002243101
I
SMU15012780
Schmidtea mediterranea
SMU15012780
I
SMU15029512
Schmidtea mediterranea
SMU15029512
I
SMU15032021
Schmidtea mediterranea
SMU15032021
I
SMU15037895
Schmidtea mediterranea
SMU15037895
I
SPER_0001880401
Spirometra erinaceieuropaei
SPER_0001880401
I
SPER_0003105501
Spirometra erinaceieuropaei
SPER_0003105501
I
TASK_0000469001
Taenia asiatica
TASK_0000469001
I
TsM_000611800
Taenia solium
TsM_000611800
I
TsM_000892700
Taenia solium
TsM_000892700
I
D917_00900
Trichinella nativa
D917_00900
I
EFV57815
Trichinella spiralis
EFV57815
I